Gene Rleg_6875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6875 
Symbol 
ID8022458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp327255 
End bp328388 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID644833737 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002984871 
Protein GI241666787 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.765762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTT TCGACTCTTC CGCGACGCCA CCGACAACCG ACATCGTGAC CAAGCCATCG 
CGTGGGCATG AAAGCTATAT CGCCCTTGTC TGGCGTCGGT TGAGGCGCTC CTGGACCGGC
ATGGCCGGGC TCGTGCTCGT CGCGCTCTTG ATCCTCATGG CGATCTTTGC CGATTTCTTC
GCGCCGATGG ATCCGAAGGC GACCGATGTC GGCTTCGCGC CGCCACAGGT GATGAGCTTC
CACGACAAGG ACGGCGATTT CGTCTTCCAG CCGCGCGTCT ACGCGCTGTC GGATTCCGAA
GAGCTTGACC CCGTTACCTT CCAGCCGATC GTCGGCATCG ACTACGACAA TCCGCGGCTG
CTCGGCTTCT TCGTCAAGGG CGCCGAATAC CGGCTTTTCG GCCTGATCCC GGCCAGCCGG
CACTTCTTCG GCTCGACCGA CGGCCAGCCG GTGCATTTCC TCGGCACCGA CAAGTTCGGC
CGCGACGTGC TGTCGCGCGC CATCATCGGC TCGCGCATTT CGCTGACGAT TGCCCTGACG
GTTGTCTTCA TCGTCACCAT CATCGGCACG ACCGTCGGCA TGGTGTCGGG TTACTTCGGC
GGCACCTTCG ACGTCTGGCT GCAGCGTTTC GTCGACCTGG TGCTCGCCTT CCCGCAATTG
CCGCTCTATC TGGCGCTGAC CTCGTTGATC CCGGTGACGG CGCCGACCAA CGTCTTCCTT
GCCTTCGTCA TCGTCGTGAT GTCGGCGCTC GGCTGGGCGC AGATGTCGCG CGAGGTGCGC
GGCAAGACCT TGGCACTTGC CCGCATCGAT TATGTCCGGG CAGCCATGGC CGTCGGCGCC
ACCGACACGC GCATCATCAT GCAGCACATC TTCCCGAATG TGATGAGCCA CGTCATCGTC
GCGGTGACGC TGCATATACC GAGCGTCGTG CTGTTGGAAT CCTTCCTCGG TTTCCTCGGT
TTCGCCGTCA AGCCGCCGCT GATCTCCTGG GGGCTGATGC TGCAGGATAC GGCGACCTAT
TCGGTCATCG GCTCCTATCC CTGGATTCTC GCTCCTGTCG GCTTCGTGCT CGTCACCGTC
TTCGCGTTCA ACGCGCTCGG CGACGGATTG CGCGACGCGG TCGATCCTTA TTGA
 
Protein sequence
MLAFDSSATP PTTDIVTKPS RGHESYIALV WRRLRRSWTG MAGLVLVALL ILMAIFADFF 
APMDPKATDV GFAPPQVMSF HDKDGDFVFQ PRVYALSDSE ELDPVTFQPI VGIDYDNPRL
LGFFVKGAEY RLFGLIPASR HFFGSTDGQP VHFLGTDKFG RDVLSRAIIG SRISLTIALT
VVFIVTIIGT TVGMVSGYFG GTFDVWLQRF VDLVLAFPQL PLYLALTSLI PVTAPTNVFL
AFVIVVMSAL GWAQMSREVR GKTLALARID YVRAAMAVGA TDTRIIMQHI FPNVMSHVIV
AVTLHIPSVV LLESFLGFLG FAVKPPLISW GLMLQDTATY SVIGSYPWIL APVGFVLVTV
FAFNALGDGL RDAVDPY