Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6825 |
Symbol | |
ID | 8022408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | - |
Start bp | 269707 |
End bp | 270408 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644833691 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_002984825 |
Protein GI | 241666741 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.397498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCC TCATGGTATT CACCTCGCAC GACACCCTCG GAAGTACAGG GCGCAAGACT GGTTTTTGGC TGGAGGAGGG CGCCGCACCG TATTACGTCT TCCGCGATGC AGGCGTCGAC TTGACACTCG TGTCCCCCAA AGGCGGTCAA CCTCCGATCG ATCCGAAGAG CGATCTGCCG GAAAATCAGA CGCCCGCCAT GACGCGGTTC AAGGCCGACG AGGCCGCGCA GAAGGTTTTT GCGAGCACCA AGAAGCTGAG CGAAGCCCGT TCCGAAGATT TCGACGCCGT CTTTTATCCC GGTGGGCACG GTCCCATGTG GGATCTCGTG GACAACCCGG AGTCCATCAA GCTAATCGAG TCCTTTTACA ACTCCAGCAA GCCGGTGGCG GCAGTCTGCC ACGCGCCGGC CGTGCTTCAC CGCGTCACCT ATAGAGGCGC TCCGATCGTC AAGGGAAAGC GGGTGACAGG CTTTACCAAT GGCGAGGAGG AGGAAGTGCA ACTGACGAAG GTCGTTCCTT TCCTTGTTGA GGACGAGCTC AAACGTCTCG GCGGTCTCTA TGAGAAGAAG GCGAACTGGG AGAGCTTCGC TATCACCGAC GGCATGTTGA TCACTGGGCA GAACCCGGCA TCTTCCACCG CGGGTGCGCA GGCCCTCATC AAGCTTCTCA CCAGTTTGAA AGCCGGCGCC GTCGTCGCCT AG
|
Protein sequence | MKILMVFTSH DTLGSTGRKT GFWLEEGAAP YYVFRDAGVD LTLVSPKGGQ PPIDPKSDLP ENQTPAMTRF KADEAAQKVF ASTKKLSEAR SEDFDAVFYP GGHGPMWDLV DNPESIKLIE SFYNSSKPVA AVCHAPAVLH RVTYRGAPIV KGKRVTGFTN GEEEEVQLTK VVPFLVEDEL KRLGGLYEKK ANWESFAITD GMLITGQNPA SSTAGAQALI KLLTSLKAGA VVA
|
| |