Gene Rleg_6820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6820 
Symbol 
ID8022403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp263838 
End bp264518 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content59% 
IMG OID644833686 
Productnuclease (SNase domain protein) 
Protein accessionYP_002984820 
Protein GI241666736 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0330594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.398913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAACA CGAAGTTCAG ACACACGGGC TGGATGATCG TCATCATCCT ATTCGCGATC 
GGGGCATTCC CACTGGAATC GACGGCGGCC ACGGTGCGGG TCATAGACGG GGACACCATC
CTTGTTGACC AAATCACGGT TCGGCTCGAC GGAATCGACG CACCCGAGGC CGGACAGAAA
TGCGCTTCTC TCTCCGGACG GGATTGGCCC TGCGGCAAGG TCGCCATCGC GGCGATGGAG
GAACTGGTGG CATCGGGAGA CGTCGTCTGC GATGATCGCG GAGTGGACAT CTATCAACGA
CAGCTAGGTG TATGTCGTGT CGGAAAGCGT GAGATCAATG CCGAAATGGT CGCGTCGGGC
AACGCCTGGG CATTCCGAAA ATACTCCACC GACTACGTCA CACTCGAGGA AAGGGCCCAC
AACGAGCACC TGGGGATTTG GCAGGCTTCC ACGATCCCCG CGTGGGAATA TCGCGCCGAC
AGATGGAACG TGGCTGAGCA ACAAGCGCCT AAGGGCTGCC CGATCAAAGG CAACATCTCC
GAGAACGGCC ATATCTACCA TGCGCCTTGG TCTCCTTGGT ACGACCGCAC CAAGGTCGAT
ACCAAGAAAG GCGAGCGCTG GTTTTGTGAT GAAGCCCAGG CGCTGAAAGC CGGATGGCGG
GCGCCGCAAT GGGGCCATTG A
 
Protein sequence
MTNTKFRHTG WMIVIILFAI GAFPLESTAA TVRVIDGDTI LVDQITVRLD GIDAPEAGQK 
CASLSGRDWP CGKVAIAAME ELVASGDVVC DDRGVDIYQR QLGVCRVGKR EINAEMVASG
NAWAFRKYST DYVTLEERAH NEHLGIWQAS TIPAWEYRAD RWNVAEQQAP KGCPIKGNIS
ENGHIYHAPW SPWYDRTKVD TKKGERWFCD EAQALKAGWR APQWGH