Gene Rleg_6800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6800 
Symbol 
ID8022730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp241203 
End bp241961 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID644833667 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002984801 
Protein GI241666717 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID[TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAA CGGATTTCGT CAGTGGCTTT GCCCGCGGCC TGAAGGTGAT CGAAGCGTTC 
GGCGAAACGC GACAGCGGCT TTCCATCGCC GAGGCCGCCA AGCTGACGGA GCTCGACCGC
GCCACTGTGC GCCGCTCGCT GCTGACGCTC GCCGAGCTCG GATATGCCGA TTATGACGGC
AAGTTCTTCA CGCTGACGCC GAAGATCCTG CGGCTTGGCC ATGCCTATCT CGCAGCGACG
CCGCTGCCGG CGCTGCTGCA GCCGCATCTC GATCTTCTCT CGGAAAAGGC CGGCCAGAGC
GCCTCGGCCT CGGTGCTCGA TGGCACCGAC ATCGTCTATA TCGCCCGCGC CTCGCAACGC
CGCGTCATGT CGATCAACCT CACCCCCGGC AGCCGCCTGC CCGCCTACTG CGCCTCGATG
GGGCGCGTGC TGCTCGCAGC CCTTAGCGAG AGCGAGGCGC GCGCCATCCT CGCCCGCAGC
GAGCTGAAGC AAAACACGCC GAATACGAAG ACCGATCCGG AGGACCTCAT CACCGAATTC
CGCCGGGTCC GCACTGACGG TTACGCCATC ATCGATCAGG AGCTGGAGAT CGGCCTCTGC
TCTATCGCGG TGCCTGTCGA CAACGACCGC GGCGAAACGG TCGCGGCGAT CAATATCGGC
GCGCCGGCCG CCCTCGTCCC GGCGGCCGAG ATGAAGGAGC GCTATCTGCC GCTGCTGAAG
GAAACACAGG CCGCGTTGCG GCCGCTGCTG CGCCGGTGA
 
Protein sequence
MRETDFVSGF ARGLKVIEAF GETRQRLSIA EAAKLTELDR ATVRRSLLTL AELGYADYDG 
KFFTLTPKIL RLGHAYLAAT PLPALLQPHL DLLSEKAGQS ASASVLDGTD IVYIARASQR
RVMSINLTPG SRLPAYCASM GRVLLAALSE SEARAILARS ELKQNTPNTK TDPEDLITEF
RRVRTDGYAI IDQELEIGLC SIAVPVDNDR GETVAAINIG APAALVPAAE MKERYLPLLK
ETQAALRPLL RR