| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6799 |
|---|
| Symbol | |
|---|
| ID | 8022729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 240338 |
|---|
| End bp | 241045 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644833666 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_002984800 |
|---|
| Protein GI | 241666716 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.704148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA CAGTCGGGAG CACGGCGGAA GCCGTCTCTG AGATCGGTGA TGGCGCGACC
GTCATGATCG GTGGTTTTGG TGGCTCGGGC GCCCCGATCG AGCTCATTCA TGCCTTGATC
GACAAGGGCT CCAAGAACCT CACCGTGATC AACAACAATG CCGGCAACGG GCGCATCGGT
ATTGCAGCGA TGATCGATGC CGGCATGGTC AGAAAGATGA TCTGCTCATT CCCGCGTTCG
TCGGATCCGC GCGCCTTCAC GGATAAATAT CTGGCCGGCG AAATTGAGCT CGAGCTGGTG
CCGCAGGGAA CGCTTGCCGA GCGCATCCGC GCCGGCGGAG CCGGCATCCC GGCTTTCTAT
ACGCCGACCG CCTACGGCAC CGAACTGGCC AACGGCAAGG TCATCGCCGA ATTCGATGGC
CGCCACTATG TGCAGGAGCG CTGGCTGAAG GCCGACTTCG CGATCGTCAA GGCTGCGATC
GGCGATATCC AGGGCAACCT CACCTACAAC AAGGCCGGCC GCAACTTCAA TCCGCTGATG
TGCATGGCAG CTGCGAAGAC CATCGTCCAG GTGTCATCGA TCGTGCCGGC CGGCGGCATC
GATCCCGAGC AGGTGGTGAC ACCAGGCATC TTCGTCGACC GCGTCGTCAC TGTTTCCAAT
CCCCAGCAGG AAGAAGAGCT CATTCGAGCC GGAGTGGCCT ACGTATGA
|
|---|
| Protein sequence | MDKTVGSTAE AVSEIGDGAT VMIGGFGGSG APIELIHALI DKGSKNLTVI NNNAGNGRIG
IAAMIDAGMV RKMICSFPRS SDPRAFTDKY LAGEIELELV PQGTLAERIR AGGAGIPAFY
TPTAYGTELA NGKVIAEFDG RHYVQERWLK ADFAIVKAAI GDIQGNLTYN KAGRNFNPLM
CMAAAKTIVQ VSSIVPAGGI DPEQVVTPGI FVDRVVTVSN PQQEEELIRA GVAYV
|
|---|
| |