| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6797 |
|---|
| Symbol | |
|---|
| ID | 8022727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 238422 |
|---|
| End bp | 239627 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644833664 |
|---|
| Product | beta-ketoadipyl CoA thiolase |
|---|
| Protein accession | YP_002984798 |
|---|
| Protein GI | 241666714 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG CCTTTATCTG CGACTATATC AGAACGCCGA TCGGCCGTTT CGCCGGCTCG
CTCTCCCAGG TGCGGGCCGA CGATCTCGGT GCCATCCCGC TGAAGGCACT GATGCAACGA
AATGCCGCCG TCGATTGGGA AGCCGTCGAC GATGTGATCT TCGGCTGCGC CAACCAGGCG
GGTGAGGACA ACCGCAATGT CGCGCGCATG TCGGCTCTGC TCGCCGGCCT GCCGATCGCC
GTCCCCGGCA CGACGATCAA CCGGCTCTGC GGCTCCGGCA TGGATGCGGT GATCACGGCC
GCACGCGCCA TCCGCGCGGG CGAAGCCGAG CTGATGATCG CTGGTGGCGT CGAGAGCATG
TCACGCGCGC CGTTCGTCAT GCCGAAGGCC GAGACGGCCT TTTCACGGGC CGCCGAAATC
CATGACACGA CGATCGGCTG GCGCTTCGTC AACCCGCTGA TGAAGAAGCA GTACGGCGTC
GATTCCATGC CGGAGACTGG CGAGAATGTC GCCGAGGACT ATCATGTCAG CCGCGAGGAT
CAGGATGCCT TCGCGGTGCG AAGCCAGGCG AAGGCGGCCG CTGCCCAGGC GAACGGACGG
TTGGCGAAGG AGATCACCCC GGTGACCATC TCGCAGCGCA AGGGCGATCC TGTTATCGTC
GACAAGGACG AGCATCCGCG CGCAACCACG ATCGAAACGC TGGCGAAACT CGCGACACCT
TTCAAAAAAG AAGGCGGCAC GGTGACAGCA GGCAATGCCT CCGGCGTCAA TGACGGGGCG
GCGGCGCTGA TCGTCGCTTC GGAAGCGGCG GCGCGGAAAT ACGGCCTGAC GCCGATCGCC
CGCATCCTCG GCGGCGCGGC TGCCGCCGTT CCGCCAAGGG TGATGGGCGT CGGGCCGATC
CCGGCCTCGC GCAAGCTGAT GGCACGGCTC GGCATGACCG CGGATCAGTT CGACGTGATC
GAACTCAACG AGGCCTTTGC CAGCCAGGGG CTGGCGGTGC TGCGCGCGCT CGGCATTGCC
GATGATGATG CGCGGGTGAA CCGCAATGGC GGCGCGATCG CGCTCGGCCA TCCGCTTGGC
ATGTCGGGTG CACGCATCAC CGGCACGGCT GCCCTCGAGC TTTTGCAGAC CGGCGGACAA
TATTCGCTGT CGACCATGTG CATCGGCGTC GGGCAGGGGA TTGCGATAGC ACTTAAAAGG
GTTTGA
|
|---|
| Protein sequence | MTEAFICDYI RTPIGRFAGS LSQVRADDLG AIPLKALMQR NAAVDWEAVD DVIFGCANQA
GEDNRNVARM SALLAGLPIA VPGTTINRLC GSGMDAVITA ARAIRAGEAE LMIAGGVESM
SRAPFVMPKA ETAFSRAAEI HDTTIGWRFV NPLMKKQYGV DSMPETGENV AEDYHVSRED
QDAFAVRSQA KAAAAQANGR LAKEITPVTI SQRKGDPVIV DKDEHPRATT IETLAKLATP
FKKEGGTVTA GNASGVNDGA AALIVASEAA ARKYGLTPIA RILGGAAAAV PPRVMGVGPI
PASRKLMARL GMTADQFDVI ELNEAFASQG LAVLRALGIA DDDARVNRNG GAIALGHPLG
MSGARITGTA ALELLQTGGQ YSLSTMCIGV GQGIAIALKR V
|
|---|
| |