| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6739 |
|---|
| Symbol | |
|---|
| ID | 8022669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 172734 |
|---|
| End bp | 173846 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644833606 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_002984740 |
|---|
| Protein GI | 241666656 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.474516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATCTCG CATTTTACGA AAGCCTGGCC TCCGTAGAAG ATCGCTGGGC GGGTTCACAG
GGAGCAGTTC CCTGGAACTT TTACCAGCGG CCTGAGCTCA CTGGCGAATA CGCCGTTGAA
GCGGACGGAA CGATTTCGGT TCCGCTTTTG GGACGCTTCC CGGTTCGAGG GCTTCCTCCG
TCGGATGTGG AGGCGATAAT TCTGCCGTCC TACGAAAGTT TGGTCGGCAG AAAGGGGTTC
GTGAATATCG TCAAGATTGA GCACCAGCCT ATTTATATTA CCGGCCCGGT TCGTAATCCT
GGCTCGTTTC GATATGTTGA TGGCATGACC GTTCTGCATG CCGTTGCGCA AGCCGGTGGC
ATGGCGGCGA AGACTATTGA GCCATGGCAG AGTGTGGAAA TTACACGCCA GATCGAGCGG
TTGAAAGTTG GGCTGTCCGA TCTGAAGCGG CTTGCGTCGC GAACCGAGGT GCTCAGGGCG
AAGCGCGATT CCGTACAAAT TGCCAGCATT GGCACACCTG TTCTTGGTCC CGATCCCGAT
GCTCAACGGT TGCTGGATGA TGAGACATGG CAGCGCCAGT TGGTAACGAC GAGCAAGGAT
GCGCAGAGCA GTGCTTTCGT AAAATCTGTT GCCGATGCTC AGACCGATCT CGATCTGCGT
CAGGCACGCG TCGGCAATTA TGATGCCACC ATTCGGGTCC GTCAGGATCG GCTGGCAAGT
ATCGAGAATT TGGCCAAAAA CAAACTTGTC ACCAGCATTG AGTTGACCCG GGCACAAAGC
GAACTGACCG AGTCGGAAGA TCGAAAGCAG CAAGCCGTCA TCGATGTAGA GAGCGCGAAG
CAACGGCTGG CGGCAGCAAA ACAGGACGTT GAGCGCGATC GTATCGAACG CAAGATCGAG
ATCGAAAAGT CGGCAGCGGA TGCTGAAAGA GGCCTATCCA CGGCATTGCA GACGACCGAG
AGCGATCTTG AAATTTTCCA GTCCATGGTA TCGTCGAACG ATAGCGGCGA TGTTGAATTC
GAAATCGTTC GGCCTGGACC GAATGGTGTC ATCGTCGAAG CTGCGACCGA AGAGACGGTC
TTACAGCCCG GCGATCTGAT CAAAGTACAT TGA
|
|---|
| Protein sequence | MNLAFYESLA SVEDRWAGSQ GAVPWNFYQR PELTGEYAVE ADGTISVPLL GRFPVRGLPP
SDVEAIILPS YESLVGRKGF VNIVKIEHQP IYITGPVRNP GSFRYVDGMT VLHAVAQAGG
MAAKTIEPWQ SVEITRQIER LKVGLSDLKR LASRTEVLRA KRDSVQIASI GTPVLGPDPD
AQRLLDDETW QRQLVTTSKD AQSSAFVKSV ADAQTDLDLR QARVGNYDAT IRVRQDRLAS
IENLAKNKLV TSIELTRAQS ELTESEDRKQ QAVIDVESAK QRLAAAKQDV ERDRIERKIE
IEKSAADAER GLSTALQTTE SDLEIFQSMV SSNDSGDVEF EIVRPGPNGV IVEAATEETV
LQPGDLIKVH
|
|---|
| |