Gene Rleg_6729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6729 
Symbol 
ID8022659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp160644 
End bp161849 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID644833596 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002984730 
Protein GI241666646 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGA ATCTCATTGC ATCAGTTGCA TTTCTGCTTG CAAGCAGCAC AGCGGTGCTC 
GCGCAGAGCG CGACCGACGG CAAGGTCAAG ATCGGCATCC TGAACGACCA GTCGGGTGTC
TATGCCGATT TCGGCGGCAA GTCCTCCGTC GAAGCCGCCA AGATGGCGGT CGAGGATTTC
GGCGGCAAGG TGCTGGATGT TCCGGTCGAG ATCGTCGATG CCGACCACCA GAACAAGCCT
GATATCGCCT CCAATATCGC CCGCCAATGG TACGATACCG AGCAGGTGGA TGCGATCATG
GAACTGACGA CCTCGTCCGT GGCGCTCGCC GTGCAGGCAA TCGCCAAGGA GAAAAAGAAG
ATCGACATCG TCACGGGTGC TGCGACGACG GATCTGACCG GCAAGGCCTG CTCGCCTTAT
GGCTTCCACT GGGCCTATGA CACCCATGCA CTGGCCGTCG GCACCGGTGG CGCGCTCGTC
AAGCAGGGCG GCGATAGCTG GTTCTTCCTG ACTGCCGACT ATGCCTTCGG CTATTCGCTG
GAACAGCAGA CCAGCGATTA TGTCAAGGCA AGCGGCGGCA AGGTGGTCGG CGCCGTCCGC
CATCCGCTCT CGACCCAGGA CTTCTCGTCC TTCCTGTTGC AGGCGCAATC GTCCGGCGCC
AAGGTGATCG GCCTTGCCAA TGCCGGCCTC GACACCTCGA ACGCCATCAA GCAAGCGGCC
GAATTCGGCA TCACCCAGGG CGGCCAGCAT CTGGCGGCGC TGCTCTTCAC GCTCGCCGAA
GTCCATGGCC TCGGCCTCGA AGCGGCTCAA GGGTTGACGC TGACGGAAGG GTTTTACTGG
AATCGCGACG ACGAAAGCCG CGCCTTCGCC AAAAAATTCT TCGCCCGCAC CGGCAAGATG
CCGAACATGA TCCATACGGG CACCTATTCG GCAGTGACGC AATATCTGAA GGCGGTGAAG
AAGGCCGGCA CCGACGAGAC GGAAGCCGTC GCCAAGCAGT TGCATGAACT GCCGGTCGAT
GACGTCTTCG GCCGCGGCGG CACGGTCGGC GCCAATGGCC GGATGATCCA TGACATGTAC
CTGCTGCAGG TCAAGAAGCC TTCCGAAAGC AAGGAGCCGT GGGATTATTT CAACGTGCTC
GCCACCATTC CCGGCAAGGA AGCCTATATC GATCCCGCCA AGAGCGGCTG CGATCTGGTG
AAGTAG
 
Protein sequence
MRKNLIASVA FLLASSTAVL AQSATDGKVK IGILNDQSGV YADFGGKSSV EAAKMAVEDF 
GGKVLDVPVE IVDADHQNKP DIASNIARQW YDTEQVDAIM ELTTSSVALA VQAIAKEKKK
IDIVTGAATT DLTGKACSPY GFHWAYDTHA LAVGTGGALV KQGGDSWFFL TADYAFGYSL
EQQTSDYVKA SGGKVVGAVR HPLSTQDFSS FLLQAQSSGA KVIGLANAGL DTSNAIKQAA
EFGITQGGQH LAALLFTLAE VHGLGLEAAQ GLTLTEGFYW NRDDESRAFA KKFFARTGKM
PNMIHTGTYS AVTQYLKAVK KAGTDETEAV AKQLHELPVD DVFGRGGTVG ANGRMIHDMY
LLQVKKPSES KEPWDYFNVL ATIPGKEAYI DPAKSGCDLV K