Gene Rleg_6710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6710 
Symbol 
ID8022620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp139330 
End bp140325 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID644833577 
Productrhamnose ABC transporter, periplasmic rhamnose-binding protein 
Protein accessionYP_002984711 
Protein GI241666627 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR02637] rhamnose ABC transporter, rhamnose-binding protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.440152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CAAAGAAACT CGCAATCGGC GTGGCATTTG CCGTCGCCAT GATGGCCGGC 
ACGGCAAGTG CTGCCGACAT CAAGATCGGT CTCGTCGTCA AGTCGCTCGG CAACGGCTTC
TTCGATGCTG CCAACAAGGG CGCGCAGGAA GCTGCCAAGG AGCTCGGCGG CGTCGAGGTC
ATCTATACCG GTCCGACGAC GACGACGGCC GAAGGCCAGA TCGAAGTCAT CAACTCGCTG
ATCGCTCAGG GCGTCAGCGC CATCGCCGTT TCGGCCAACG ATCCCGACGC GCTCGTTCCG
GCGCTGAAGA AGGCTGCACA GCGCGGCATC AAGGTCATCT CCTGGGATTC CGGCGTCGCA
CCTGAAGGCC GTATTCTGCA GCTCAACCCG TCGTCCAACG AACTGATCGG CAAGATGTGC
CTGACGCTCG TCAAGGACCA TCTTGACGGC GGCAAGGGTG ACTTCGCCAT CCTGTCGGCG
ACGACCACCT CGACCAACCA GAACATCTGG ATCGACCAGA TGAAGAAGCA GCTCAAGGAT
TTCCCGGGCC TCAACCTCGT CACCACGGTC TATGGCGACG ATCTCTCGGA CAAGTCCTAT
CGTGAAGCCG AAGGCCTCTT GAAGGCGAAC CCGAACATCA AGGTCATCGT CGCTCCGACC
ACCGTCGGCG TTCTCGCCGC TTCCAAGGTC GTCGAAGACA AGGGTCTTGT CGGCAAGGTC
TACGTCACCG GTCTCGGCCT GCCGTCCGAA ATGGCCGGCG CGATCAAGTC GGGCGCCACG
AAGGAATTCG CCATCTGGAA CCCGATCGAT CTCGGCTACT CCGCAACGCA GATCGCCTAT
CGCCTCGTCA AGGGCGAGAC CGACGGCAAG CCGGGCAGCG AGATCGAAGT CGGCCGCATG
GGCAAGATCA AGGTCGGCGA CAATGGTGAA GCCGCCATGG CCGATCCCTT CGTCTACAAT
GCTTCGAATA TCGACCAGTT CTCCAAGGTC TTCTGA
 
Protein sequence
MKLAKKLAIG VAFAVAMMAG TASAADIKIG LVVKSLGNGF FDAANKGAQE AAKELGGVEV 
IYTGPTTTTA EGQIEVINSL IAQGVSAIAV SANDPDALVP ALKKAAQRGI KVISWDSGVA
PEGRILQLNP SSNELIGKMC LTLVKDHLDG GKGDFAILSA TTTSTNQNIW IDQMKKQLKD
FPGLNLVTTV YGDDLSDKSY REAEGLLKAN PNIKVIVAPT TVGVLAASKV VEDKGLVGKV
YVTGLGLPSE MAGAIKSGAT KEFAIWNPID LGYSATQIAY RLVKGETDGK PGSEIEVGRM
GKIKVGDNGE AAMADPFVYN ASNIDQFSKV F