Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6710 |
Symbol | |
ID | 8022620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 139330 |
End bp | 140325 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833577 |
Product | rhamnose ABC transporter, periplasmic rhamnose-binding protein |
Protein accession | YP_002984711 |
Protein GI | 241666627 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.440152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCG CAAAGAAACT CGCAATCGGC GTGGCATTTG CCGTCGCCAT GATGGCCGGC ACGGCAAGTG CTGCCGACAT CAAGATCGGT CTCGTCGTCA AGTCGCTCGG CAACGGCTTC TTCGATGCTG CCAACAAGGG CGCGCAGGAA GCTGCCAAGG AGCTCGGCGG CGTCGAGGTC ATCTATACCG GTCCGACGAC GACGACGGCC GAAGGCCAGA TCGAAGTCAT CAACTCGCTG ATCGCTCAGG GCGTCAGCGC CATCGCCGTT TCGGCCAACG ATCCCGACGC GCTCGTTCCG GCGCTGAAGA AGGCTGCACA GCGCGGCATC AAGGTCATCT CCTGGGATTC CGGCGTCGCA CCTGAAGGCC GTATTCTGCA GCTCAACCCG TCGTCCAACG AACTGATCGG CAAGATGTGC CTGACGCTCG TCAAGGACCA TCTTGACGGC GGCAAGGGTG ACTTCGCCAT CCTGTCGGCG ACGACCACCT CGACCAACCA GAACATCTGG ATCGACCAGA TGAAGAAGCA GCTCAAGGAT TTCCCGGGCC TCAACCTCGT CACCACGGTC TATGGCGACG ATCTCTCGGA CAAGTCCTAT CGTGAAGCCG AAGGCCTCTT GAAGGCGAAC CCGAACATCA AGGTCATCGT CGCTCCGACC ACCGTCGGCG TTCTCGCCGC TTCCAAGGTC GTCGAAGACA AGGGTCTTGT CGGCAAGGTC TACGTCACCG GTCTCGGCCT GCCGTCCGAA ATGGCCGGCG CGATCAAGTC GGGCGCCACG AAGGAATTCG CCATCTGGAA CCCGATCGAT CTCGGCTACT CCGCAACGCA GATCGCCTAT CGCCTCGTCA AGGGCGAGAC CGACGGCAAG CCGGGCAGCG AGATCGAAGT CGGCCGCATG GGCAAGATCA AGGTCGGCGA CAATGGTGAA GCCGCCATGG CCGATCCCTT CGTCTACAAT GCTTCGAATA TCGACCAGTT CTCCAAGGTC TTCTGA
|
Protein sequence | MKLAKKLAIG VAFAVAMMAG TASAADIKIG LVVKSLGNGF FDAANKGAQE AAKELGGVEV IYTGPTTTTA EGQIEVINSL IAQGVSAIAV SANDPDALVP ALKKAAQRGI KVISWDSGVA PEGRILQLNP SSNELIGKMC LTLVKDHLDG GKGDFAILSA TTTSTNQNIW IDQMKKQLKD FPGLNLVTTV YGDDLSDKSY REAEGLLKAN PNIKVIVAPT TVGVLAASKV VEDKGLVGKV YVTGLGLPSE MAGAIKSGAT KEFAIWNPID LGYSATQIAY RLVKGETDGK PGSEIEVGRM GKIKVGDNGE AAMADPFVYN ASNIDQFSKV F
|
| |