Gene Rleg_6680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6680 
Symbol 
ID8022590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand+ 
Start bp111775 
End bp112410 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID644833547 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002984681 
Protein GI241666597 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.842807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.587855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTT TCGACCTTTC GCTCTATCTC GTCCTCGACC CCGATCTTTG CGCCGGGATC 
GGCATGGTCG AAACTGCGCG CCTTGCCATT GCCGGCGGCG CCACCATGGT GCAACTGCGC 
GACAAACATG CCGGCACCAT CGGGATGATC GAGACCGGCC GCGCCCTGAA ACAGGCATTG 
GATGGAACCG GCGCCCTCCT CATCGTCAAC GACGATGTCG AGGCGGCCAT CGCCATCGGC 
GCTGACGGGT TGCATATCGG CCAGGAGGAC ATGGATGCGA TGAGAGCGCG GACGATGATC 
GGCCCCGACA TGATCCTTGG CCTGTCGGTC GAGAGCGAGG CGCTTGCGAA CGCGGTCGAC 
CCTGATCTCG TCGACTACAC GGGCGTCGGG CCAGTGTTTG CGACGCCGAC CAAGGCCGAC 
CACAAGCAGC CGATCGGCTT TGACGGCCTT GCAAGGCTGG TGAAGGCCTC GCCGGTGCCG 
TCCGTCGCTA TCGGCGGGCT CAAGGCGGAT CATGTCGCCC AGGTGTTCGC CGCCGGCGCC 
AGCGGGCTTG CCGTTGTCTC CGCCATCTGC GGCACGCCCG ACCCCGAAGC GGCCACGCGC 
CGCATCGCTG CAGAAATCCG AAAGGCCCGC GCATGA
 
Protein sequence
MKAFDLSLYL VLDPDLCAGI GMVETARLAI AGGATMVQLR DKHAGTIGMI ETGRALKQAL 
DGTGALLIVN DDVEAAIAIG ADGLHIGQED MDAMRARTMI GPDMILGLSV ESEALANAVD 
PDLVDYTGVG PVFATPTKAD HKQPIGFDGL ARLVKASPVP SVAIGGLKAD HVAQVFAAGA 
SGLAVVSAIC GTPDPEAATR RIAAEIRKAR A