| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6650 |
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| Symbol | |
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| ID | 8022560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012858 |
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| Strand | + |
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| Start bp | 81285 |
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| End bp | 83042 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644833517 |
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| Product | ABC transporter related |
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| Protein accession | YP_002984651 |
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| Protein GI | 241666567 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.154818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0508518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGACA GACAAAGACT CCGGCTTTTC CTTCTTCTGG CGCTGGCGCT CACAGCTCTG
CTGTTGATCG TCTTCGGACC GATGTTTCTC GGCCGCTTCA GCCTCAACGT ACTGACGCGT
TCGATGATCT ACGCCATGCT GGCGGTCACC GTCGACTTGC TCTGGGGCTA CACGGGTGTC
CTCACTTTCG GGCAGGCGGC GTTTTTTGGC GTGGGCGCCT ATGCCACCGC CATGGTTCTT
ACCCATATCG GCGCAAGCCC GGCGCTTTTC GTCGTCGCGC TTGTCGCCGC CGTGCTCGTT
CCACTCGTGC TTGGCCTCGC CGTTGGCTGG CTGTCGTTCT ATCACGGCTC GACACCGCTC
TATGCCACCG TGATCTCGCT CGTGGTGCCG ATCGTCGTCA CACAGCTCGT CTTTTCGGGC
GGCACGTGGA CTGGTTCCTC GAGTGGCCTC GTCGGTTACG AAACCCTCCC GCTCGGGCTT
CCTGGCTATT TCCGCCTGTC AGGCGCGAGC CTGCTGGTCT TGGCCGTTCT TGCCATCGTC
TTCGTCCGGT CGGACGCCGG CCGCCTGCTC GTCGCAATCC GCGACAATGA AGCCCGCGTT
GCCTATCTGG GCATGAACCC CGCCCGGCTG AAGATCGTCC TGACGGGCGT TCTGGCTGGC
GTATGCGGCC TGGCGGGCTT CCTTTTTGCC AACGCTTCCG GTGTCGTCGC TCCTGAAAAC
ACCGGTTTCG TTTTTGGAAC CGAACTCGTC GTCTGGACGG CGCTTGGCGG CCGGGGAACG
ATTATCGGAC CGCTGTTTGG CGCAATCGGC ATCGATTATC TGAGCGCCAG TCTTTCGGGC
GATCTGCCCT TCCTGTGGCA ACTGATCATC GGTGCGCTCT TCGTCGCCAT GATCATCCTT
TTGCCGGGCG GCCTCGCTTC CCTGGTGACG CGGTTCCTGC AGTCGGCGAA CTCCAGCAGC
ACTCTAAAGT CGTTGCCGAC CCGCATCGTC GCCAAGGATG GTGCGTTGGC GGGCAAAAGC
CTTCTGTCGA TCCGCGGTCT CGGCAAGTCC TATGGCAGCT TCTCCGTCCT CAAGGGCATC
GACCTTGAAA TCGGCGCTGG AGAACTCGTC AGCCTGGTCG GCCCCAACGG CGCCGGCAAG
ACCACGCTGA TGCGTTGTCT GTCGGACGGT ACCCAGCAGA TCGAAGGTCA GGTAGACATC
ATCGGTACAA ATATCGCCGG TCGTGCACCC GAACGGATCG TCGCCCTCGG CGTCGGCCGA
AAATTTCAGG TTGCCAGCAT CTTCGACAGC ATGACCATCG GTGAATGCCT CAAGATGGCG
CGTTTCAGCC GCGAGAGACC CAACGCGATG CGGTCGCTTG GCGAGATCAT GCTGCCGGCA
GCGGCAGCCG AGATCCTGAC GCTCACCGGC ATGGCTGATA TGCTGGACAA GCCGGTCTTG
CTGCTGTCGC ATGGTCAAAG ACAGGCTCTC GAACTGGCGA TGGTCGTCGC TCTGGAACCA
CGCATCATTC TTCTCGACGA GCCGACTGCG GGTCTTACCA AGACTGAGCG CATGACCATC
GGAACCATCC TCAAGAAACT GACGGACGAA ATGGGTTTCG CCGCCATCCT GGTCGAACAC
GATCTGGATT TCGTGCGCAA CATATCGAGC CGCATCGTGG TTCTCCACCA GGGCAAGCTC
GTTCTCGACG GCACGGTGAA TGACGTGGTC AATTCCGAAA CGGTTCGCAC CATCTACGCA
GGAGGCGCCC ATGGCTGA
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| Protein sequence | MRDRQRLRLF LLLALALTAL LLIVFGPMFL GRFSLNVLTR SMIYAMLAVT VDLLWGYTGV
LTFGQAAFFG VGAYATAMVL THIGASPALF VVALVAAVLV PLVLGLAVGW LSFYHGSTPL
YATVISLVVP IVVTQLVFSG GTWTGSSSGL VGYETLPLGL PGYFRLSGAS LLVLAVLAIV
FVRSDAGRLL VAIRDNEARV AYLGMNPARL KIVLTGVLAG VCGLAGFLFA NASGVVAPEN
TGFVFGTELV VWTALGGRGT IIGPLFGAIG IDYLSASLSG DLPFLWQLII GALFVAMIIL
LPGGLASLVT RFLQSANSSS TLKSLPTRIV AKDGALAGKS LLSIRGLGKS YGSFSVLKGI
DLEIGAGELV SLVGPNGAGK TTLMRCLSDG TQQIEGQVDI IGTNIAGRAP ERIVALGVGR
KFQVASIFDS MTIGECLKMA RFSRERPNAM RSLGEIMLPA AAAEILTLTG MADMLDKPVL
LLSHGQRQAL ELAMVVALEP RIILLDEPTA GLTKTERMTI GTILKKLTDE MGFAAILVEH
DLDFVRNISS RIVVLHQGKL VLDGTVNDVV NSETVRTIYA GGAHG
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