| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6641 |
|---|
| Symbol | |
|---|
| ID | 8022891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 70651 |
|---|
| End bp | 72279 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644833508 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002984642 |
|---|
| Protein GI | 241666558 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.274459 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA GAACGCTTTT GAATGTCCGC AACCTGTCGC TTCAGGTCAC TGGGACCGGT
GTGCAGGTCG TCAAGGACGT CAGCTTCGAC ATCGCGCCGG GCGAAATCTT CGGCATCGTC
GGAGAAAGCG GATCGGGCAA GACGCTGGCA ACACGCGCCC TGATCTCGCT GCTGCCGGCA
CCCATCAGGG TGATCGGCGG CTCCATTGCC TACAAGGGAC GCGACGTGCT TTCCATGAAC
GGCGCGCAAT TGCGCCAGTT GCGTGGTGCG GAAATCGGTG TCGTCTTCCA GGAGCCGATG
ACCTCGCTCA ACCCCTCGAT GACCGTCGGC CGCCAACTCG AAGAAGGGTT GCAGCTGCAT
ACGAAACTTT CGAAGGAGGA ACGACGCAAA CGGATCCTCG ACATGCTGAA CCGGGTCGGG
ATCCGCGACC CCGCCGGGGC GCTCACGTCC TATCCGCATG AATTCTCAGG CGGCATGCGC
CAGCGCATCA TGCTGGCATC GGTGATGCTG CTGAAACCGG CGCTCTTGAT CGCCGACGAG
CCGACGACCG CGCTCGATGC CGTGATCCAG CGCGATGTCA TGGAATTGAT GGTGGAACTG
ACGCAGGCGG AAGGCACCGC CGTGCTGCTG ATCAGTCACG ATCTGCCGAT GGTTGCCCGC
TACACGAACC GCATCGTCGT GATGGAAAAG GGCGTGATCG TCGAAGAAGG ACGCACCGCC
GATCTGCTCG ACGCACCGCA GCGTGCCTAT ACGAAGAAAC TGCTTTCCTC CCTGCCGTTT
CGCGGAGAGA CGCGGACGAT CGACAAGACC AGGGCGCCGA TGGTCTCTGC GCGCGATATC
GTCGTCGACT ATCCGGGCCG GCGGTCGCTG ATGAAGAAGG CAACGCCAAA ACGGGCGCTG
CATGGCGTCA GCATCGATAT CCACGAGGGC GAAGTCGTGG CGCTGGTCGG CGGTTCGGGT
TCCGGCAAGA CCACGCTCGG CCGCACCATT GCCGGACTGG TCCGCGAGAG CGAAGGCGAT
ATCCGGTTCA AGGGACGCAG CCGCGACGCC GACTGGATGG ACTATCGGCT GAATTGCCAG
ATGGTGTTTC AAGATCCTTA TTCCTCGCTC GATCCGCGCA TGACCATCCT CGCGCTCGTG
GAAGAAGCGC TGCGGCTCGT TCCCGATCTC GACGCCATGA CTAAGCGCAA GCGCGCCCTG
GAGACGCTGG AGGAAGTCGG TCTTGGGTCC GACTATGCCG GGCGCTACCC GCATGAGCTT
TCGGGCGGCC AGCGGCAGCG CGTGGCGATT GCCCGCGCCA TTGCGCGCCG GCCGAAATTC
CTGATCGCCG ACGAACCGGT ATCGGCGCTT GACGTGACGG TCAGGGCGCA GGTGCTCGAA
CTCCTGTCCG ATCTGCAAAA ACGCTACGGC TTTTCCTGCC TGTTCATCAG CCATGATCTC
GGCGTGGTCG AACAGGTGGC CGATCGCGTC GTCGTCATGC AGGACGGCCG GATCATCGAG
GAGGGCGACC GCGATACGGT TTTCGACCGC CCGAAGGAGG CCTATACGCA AAGGCTTCTC
TCGGCCATCC CCGCTCTGGA CCACAATGCT CAGGGCGGCG TGATCCTCAA ATGGCGCCTG
GAGAACTGA
|
|---|
| Protein sequence | MTNRTLLNVR NLSLQVTGTG VQVVKDVSFD IAPGEIFGIV GESGSGKTLA TRALISLLPA
PIRVIGGSIA YKGRDVLSMN GAQLRQLRGA EIGVVFQEPM TSLNPSMTVG RQLEEGLQLH
TKLSKEERRK RILDMLNRVG IRDPAGALTS YPHEFSGGMR QRIMLASVML LKPALLIADE
PTTALDAVIQ RDVMELMVEL TQAEGTAVLL ISHDLPMVAR YTNRIVVMEK GVIVEEGRTA
DLLDAPQRAY TKKLLSSLPF RGETRTIDKT RAPMVSARDI VVDYPGRRSL MKKATPKRAL
HGVSIDIHEG EVVALVGGSG SGKTTLGRTI AGLVRESEGD IRFKGRSRDA DWMDYRLNCQ
MVFQDPYSSL DPRMTILALV EEALRLVPDL DAMTKRKRAL ETLEEVGLGS DYAGRYPHEL
SGGQRQRVAI ARAIARRPKF LIADEPVSAL DVTVRAQVLE LLSDLQKRYG FSCLFISHDL
GVVEQVADRV VVMQDGRIIE EGDRDTVFDR PKEAYTQRLL SAIPALDHNA QGGVILKWRL
EN
|
|---|
| |