Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6611 |
Symbol | |
ID | 8022861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | - |
Start bp | 38462 |
End bp | 40003 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833480 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002984614 |
Protein GI | 241666530 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.103598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAC GACTTGAATC TGCCCGCCCT GATGAAACCC CCGCCATCGT CTGGCTCGGC TTCATGGCGA TGTGCGTCGG CATGTTCATG GCGATCCTCG ACGTTCAGGT GGTGGCGACA TCGCTGCCGA CCATTCAGTC GGCGCTGGGT ATCGATCCCG ATCAGATGAG CTGGATACAG ACCGCTTATC TCATCGCCGA AGTGGTGGCG ATTCCGCTCA CCGGCCTCTT GACCCGACTG CTGACGATGC GATGGCTGTT CGTTACCGCC ATCAGCCTGT TCGTCGCCGC CTCGGCCGGC TGTGCGGCGA GCGGCAGCTT CGGCGAGCTG GTAGCCTGGC GGGTGCTGCA GGGCTTTTCC GGCGGAACCC TGATCCCCTC GGTGTTTTCA GCCGTGTTCA TTCTCTTCCC GAACGAGCGC CAGGCGCTTG CGACGACGAT CGCCGGCGTT CTCGCGGTGT TGGCCCCGAC CGTCGGACCG ATCGTCGGCG GATGGCTGAC TGAGACCTAT TCCTGGCACT GGCTGTTCCT GATCAATGTT ATTCCGGGCA TCGTTTCGGC AATCGTCGCT GCGTGGTTCC TGCCGCGGCA GGCGCTCGAT CCGTCTGAAC TCGGGCATCT CGACACGCTC TCGCTTCTGC TGATGGCAAC CGCATTGACG ACCCTGGAAC TCAGCCTGAA AGAGGCGCCG ACGAGCGGCT GGACCTCGGC CTATGTGCTC AGTCTGCTGA CGATCTGCCT CACATCGGGA GGCGCGTTCA TATGGCGAAC GCTGCGCCGA CGCCGTCCGA TCGTCGATCT CGGCAATTTC GGCGACCGGA ACTTTCTGGT CGGCTCGGTT TTGAGCTTTG TGCTCGGCAT CGGCCTGTTC GGCTCGGTCT ATCTCATGCC GGTCTATCTC GCTTTCATCA GGGGACACGA CGCCCTCGAA ATTGGCATGA CGATGCTGGT CACCGGCATC GCGCAATTGA TCACGGCGCC GATCGCGGTG GCGCTGGAGA AGCGGATGGA CGCGCGATTG CTGTCGGCGG CCGGTTTCGC TCTCTTTGCG ATCGGTGTCG GGATGAGCGC TTTTCAGGAT CCTCGTTCGG ACTATGACGC GATGTACTGG CCGCAGGTGG TGCGCGGCGT CGCTATCATG TTCTGCCTGC TGCCGCCGAC GCGGCTGGCG CTCGGTACAC TGCCGCCAGA GCGCATCCCC GATGCCAGCG GACTTTTCAA CCTGATGCGC AATCTCGGCG GGGCAATCGG CATCGCTCTG ATCGATACGA TCATCTACAC GCGCTCGGAG CCGCTGGGAC AAGGCCTGTG GACCCGCCTT CAAGCCGGCG ACGTCGAGGC TGCGTCATTC GTCGGCGCGC CTCTTCAGAC GATAGCGGGG CATAATGGCA GCTTCGACGC GGATACCACG GCACTGCTCG ATCCGCTGGT CCAGACCGCG GCAAGCGTCC AGGCCATCAA CGAAGCCTGG ATGGTGATTG CCGTCCTGAC CGGCTGCGCC CTGCTCTCAG TGCCCTTTGC CAGGCGGCCA ACGCCAACGT GA
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Protein sequence | MSERLESARP DETPAIVWLG FMAMCVGMFM AILDVQVVAT SLPTIQSALG IDPDQMSWIQ TAYLIAEVVA IPLTGLLTRL LTMRWLFVTA ISLFVAASAG CAASGSFGEL VAWRVLQGFS GGTLIPSVFS AVFILFPNER QALATTIAGV LAVLAPTVGP IVGGWLTETY SWHWLFLINV IPGIVSAIVA AWFLPRQALD PSELGHLDTL SLLLMATALT TLELSLKEAP TSGWTSAYVL SLLTICLTSG GAFIWRTLRR RRPIVDLGNF GDRNFLVGSV LSFVLGIGLF GSVYLMPVYL AFIRGHDALE IGMTMLVTGI AQLITAPIAV ALEKRMDARL LSAAGFALFA IGVGMSAFQD PRSDYDAMYW PQVVRGVAIM FCLLPPTRLA LGTLPPERIP DASGLFNLMR NLGGAIGIAL IDTIIYTRSE PLGQGLWTRL QAGDVEAASF VGAPLQTIAG HNGSFDADTT ALLDPLVQTA ASVQAINEAW MVIAVLTGCA LLSVPFARRP TPT
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