Gene Rleg_6611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6611 
Symbol 
ID8022861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp38462 
End bp40003 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content63% 
IMG OID644833480 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_002984614 
Protein GI241666530 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.103598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAC GACTTGAATC TGCCCGCCCT GATGAAACCC CCGCCATCGT CTGGCTCGGC 
TTCATGGCGA TGTGCGTCGG CATGTTCATG GCGATCCTCG ACGTTCAGGT GGTGGCGACA
TCGCTGCCGA CCATTCAGTC GGCGCTGGGT ATCGATCCCG ATCAGATGAG CTGGATACAG
ACCGCTTATC TCATCGCCGA AGTGGTGGCG ATTCCGCTCA CCGGCCTCTT GACCCGACTG
CTGACGATGC GATGGCTGTT CGTTACCGCC ATCAGCCTGT TCGTCGCCGC CTCGGCCGGC
TGTGCGGCGA GCGGCAGCTT CGGCGAGCTG GTAGCCTGGC GGGTGCTGCA GGGCTTTTCC
GGCGGAACCC TGATCCCCTC GGTGTTTTCA GCCGTGTTCA TTCTCTTCCC GAACGAGCGC
CAGGCGCTTG CGACGACGAT CGCCGGCGTT CTCGCGGTGT TGGCCCCGAC CGTCGGACCG
ATCGTCGGCG GATGGCTGAC TGAGACCTAT TCCTGGCACT GGCTGTTCCT GATCAATGTT
ATTCCGGGCA TCGTTTCGGC AATCGTCGCT GCGTGGTTCC TGCCGCGGCA GGCGCTCGAT
CCGTCTGAAC TCGGGCATCT CGACACGCTC TCGCTTCTGC TGATGGCAAC CGCATTGACG
ACCCTGGAAC TCAGCCTGAA AGAGGCGCCG ACGAGCGGCT GGACCTCGGC CTATGTGCTC
AGTCTGCTGA CGATCTGCCT CACATCGGGA GGCGCGTTCA TATGGCGAAC GCTGCGCCGA
CGCCGTCCGA TCGTCGATCT CGGCAATTTC GGCGACCGGA ACTTTCTGGT CGGCTCGGTT
TTGAGCTTTG TGCTCGGCAT CGGCCTGTTC GGCTCGGTCT ATCTCATGCC GGTCTATCTC
GCTTTCATCA GGGGACACGA CGCCCTCGAA ATTGGCATGA CGATGCTGGT CACCGGCATC
GCGCAATTGA TCACGGCGCC GATCGCGGTG GCGCTGGAGA AGCGGATGGA CGCGCGATTG
CTGTCGGCGG CCGGTTTCGC TCTCTTTGCG ATCGGTGTCG GGATGAGCGC TTTTCAGGAT
CCTCGTTCGG ACTATGACGC GATGTACTGG CCGCAGGTGG TGCGCGGCGT CGCTATCATG
TTCTGCCTGC TGCCGCCGAC GCGGCTGGCG CTCGGTACAC TGCCGCCAGA GCGCATCCCC
GATGCCAGCG GACTTTTCAA CCTGATGCGC AATCTCGGCG GGGCAATCGG CATCGCTCTG
ATCGATACGA TCATCTACAC GCGCTCGGAG CCGCTGGGAC AAGGCCTGTG GACCCGCCTT
CAAGCCGGCG ACGTCGAGGC TGCGTCATTC GTCGGCGCGC CTCTTCAGAC GATAGCGGGG
CATAATGGCA GCTTCGACGC GGATACCACG GCACTGCTCG ATCCGCTGGT CCAGACCGCG
GCAAGCGTCC AGGCCATCAA CGAAGCCTGG ATGGTGATTG CCGTCCTGAC CGGCTGCGCC
CTGCTCTCAG TGCCCTTTGC CAGGCGGCCA ACGCCAACGT GA
 
Protein sequence
MSERLESARP DETPAIVWLG FMAMCVGMFM AILDVQVVAT SLPTIQSALG IDPDQMSWIQ 
TAYLIAEVVA IPLTGLLTRL LTMRWLFVTA ISLFVAASAG CAASGSFGEL VAWRVLQGFS
GGTLIPSVFS AVFILFPNER QALATTIAGV LAVLAPTVGP IVGGWLTETY SWHWLFLINV
IPGIVSAIVA AWFLPRQALD PSELGHLDTL SLLLMATALT TLELSLKEAP TSGWTSAYVL
SLLTICLTSG GAFIWRTLRR RRPIVDLGNF GDRNFLVGSV LSFVLGIGLF GSVYLMPVYL
AFIRGHDALE IGMTMLVTGI AQLITAPIAV ALEKRMDARL LSAAGFALFA IGVGMSAFQD
PRSDYDAMYW PQVVRGVAIM FCLLPPTRLA LGTLPPERIP DASGLFNLMR NLGGAIGIAL
IDTIIYTRSE PLGQGLWTRL QAGDVEAASF VGAPLQTIAG HNGSFDADTT ALLDPLVQTA
ASVQAINEAW MVIAVLTGCA LLSVPFARRP TPT