Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6605 |
Symbol | |
ID | 8022855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 30866 |
End bp | 31606 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833474 |
Product | GntR domain protein |
Protein accession | YP_002984608 |
Protein GI | 241666524 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00449422 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGACA AGGACAACGC GGTCTTCAAC ACCATTCAGC AGGCGCCGAA CCTGCGTAGC AACCTTGCCG ATATGCTGAC GGCGCAAATC GAGTCCGGCG ACCTGAAGCC CGGCCAGCGC CTGCCGACCG AACAGGCGAT CATGATAGCG ACAGGCGTCA GCCGGACGAT CGTTCGCGAA GCGCTCGCAG CGCTGCGCGC GAAGGGGCTG ATCACCACGC GGCAAGGCCT TGGGGCTTTC GTCTCGAACG ATCCGACGCC CCGATCCTTC TCCATCATTC CCAACGACCT GCAGTCGATC GACGAGGTTC TGCGCGTGCT GGAGCTGCGC ATGGGGGTCG AATACGAAGC CGCCGGTCTT GCCGCGTTGC GGCGCACCCA GGAGGATATC GACCGCATGC AGGATCGTCT CGATGCCCTC GACAAGGCGC TTGAGGAGGG TGGATACGGC GCGCAAGAAG ACTACGCCTT CCACAGGTCC ATTCTGGTCG CGACGCAGAA CTCCTATTAC GGCCGTCTCT TCGATACGTT CGGCAACATC ATGGTGCCAC GGCAATGGGC GCGCCTGGAC AAGATGACAT CAGCCGAGCG CAAGCGCCAT GCGGCGCGCA TGCGCAGGGA ACACCATGCC ATATTCGCGG CGATCCGCGA CCGCGACGAG CCCGCCGCGC GCCGCGCCAT CCGAAGCCAC CTGTCGAAGA GCGCCGCGCG CTTCGAAGAG TTGCGTGACG CTACCGCATA A
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Protein sequence | MADKDNAVFN TIQQAPNLRS NLADMLTAQI ESGDLKPGQR LPTEQAIMIA TGVSRTIVRE ALAALRAKGL ITTRQGLGAF VSNDPTPRSF SIIPNDLQSI DEVLRVLELR MGVEYEAAGL AALRRTQEDI DRMQDRLDAL DKALEEGGYG AQEDYAFHRS ILVATQNSYY GRLFDTFGNI MVPRQWARLD KMTSAERKRH AARMRREHHA IFAAIRDRDE PAARRAIRSH LSKSAARFEE LRDATA
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