| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6604 |
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| Symbol | |
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| ID | 8022854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012858 |
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| Strand | + |
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| Start bp | 29897 |
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| End bp | 30652 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833473 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_002984607 |
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| Protein GI | 241666523 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00248172 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAAATC CCTTCGACCT TTCCGGCAGG ACTGCCGTCG TCACCGGCGC CAATACTGGC
CTCGGCCAGG CCATCGCGGC CGCACTGGCA GGAGCCGGTG CGTCGATCGT CGCCGTCGGG
CGCTCCTCGA TGGACGAAAC CGAGGCGCTG GTGAAGGAAG CGGGAGGCCG CTTCCATGTC
GTCAAGGCCG ATCTTGCCAG CATCGAACCG GTCAAGGGAA TCGTCACTGA GGCCATCCAG
ACCTTCGGCG GCCTCGACAT CCTCGTCAAC AATGCCGGCA TCATCCGCCG CGCCGATGCG
CTCGATTTCA CCGAGGAAGA CTGGGACGCG GTGATCGACG TCAATCTGAA GACCGCCTTC
TTCCTGTCGC AGGCAGCCGG CCGCCATATG GTCGACAAGG GCAGGGGCAA GATCATCAAC
ATCGCCTCGC TGCTCTCCTT CCAGGGCGGC ATCCGGATTC CGTCCTATAC CGCATCGAAA
AGCGGCCTCG CCGGACTGAC CAAGCTGCTT GCCTGCGAAT GGGCCGGGAA GGGCGTCAAC
GTCAACGCCA TTGCCCCTGG CTACTTCGTC ACCAACAACA CCACGGCGCT GCGCGAGGAT
GCCGACCGCA ATGCCGCCAT CCTTTCCCGC ATCCCGGCCG GGCGCTGGGG AACGCCGTCC
GAACTCGGCG GTGCGGCGGT ATTCCTGGCA TCGTCGGCAT CCGACTACGT GCATGGAACG
GTGCTGCCCG TCGATGGCGG CTGGCTGGCG CGCTGA
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| Protein sequence | MANPFDLSGR TAVVTGANTG LGQAIAAALA GAGASIVAVG RSSMDETEAL VKEAGGRFHV
VKADLASIEP VKGIVTEAIQ TFGGLDILVN NAGIIRRADA LDFTEEDWDA VIDVNLKTAF
FLSQAAGRHM VDKGRGKIIN IASLLSFQGG IRIPSYTASK SGLAGLTKLL ACEWAGKGVN
VNAIAPGYFV TNNTTALRED ADRNAAILSR IPAGRWGTPS ELGGAAVFLA SSASDYVHGT
VLPVDGGWLA R
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