Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6600 |
Symbol | |
ID | 8022850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012858 |
Strand | + |
Start bp | 25541 |
End bp | 26917 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833469 |
Product | histidine kinase |
Protein accession | YP_002984603 |
Protein GI | 241666519 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000947222 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCAAAC GATGCTCCTA TTCGCTGCGC AAGCGCCTGT TCTGGCGGCT CCTTGCCGTC CAATCGGTCG TCCTCATCCT GGTGATGATC GTGCTGATTT CGGTTGGCAA GATATCCGAA TTCAGGTCGA CGGAGGGCAC GATCGAGGTC CTGGGCCAGG CCGTGTTCCG CCAGCCCACC GGAGAATTGA GCCTGAGGGA GACCGAGGAT CTGCGACAGC TGCGCAAGGA CGCGCCCGAT CTCTGGTACA CCATACGCGA CCTGCAGGGT CATGTTTTGA CCGAGGGCCT GGTTCCGGAA GAATACGCTG CAATCGGCAA CACGCTCGAT CATGTCGGCC AGGCCAAATT CGGCTCGAAT CTCGACGACC ACGACCGTCC GGCTGCCCGA ATGAAGTGGA TTGCCACGGA TGGGGGACAG TTGCAGTTTC TGACGGGCAC CGGCCCAAAC TCGTCCACCT TCATCCTGCT CAAGCTTTCG CTGGTCCTTG CGAAAATTGT TATTCCGATC GTCGCAGTGA TGGCGTTGGG TGCGTTGATC GCGACGCCGC TGGTCGTGCG AAGGTCGCTG GTCGGGATCG ACCAGGCCGC GCTCCAGGCC GATACGATCG ATATCGACCA GCGTGGCGGG CGGCTGTCGG AAAACGATAC TCCCGAAGAG ATCGCGCCGC TGGTGCATGC CGTCAACCGC GCGCTCGGCC GTCTCGACGA GGGTTATGAG CGGCAGGAAC GGTTTCTGAC CGATGCCGCC CATGAACTGC GCACACCGAT CGCCATCCTG AACACGAGAA TTGGATCCCT GCCGCACAGT TCAATCAAGA CCGACCTGTT GGAAGATGCC GCAAGGCTTG CGGTTCTCAC CGAGCAGATG CTCGATCTTC AGCGACTGAA ACAGGGCAAG GTCCAGTTCA TCAAGATCGA TCTCGGCCAA CTGGCGAGGA AGGTCATCAT CGAGATGGCG CCACTGGCCT TTGCCGCCGG TTACACGGTG CAGTTCGATG TCGACGGCGC CGGCGAGATC GAGGGCGATC CCCTGGCGCT GCAGCGCGCC CTGATGAACA TCCTGCAGAA CGCGATCAAC CACGGCGGCA GGAAAGGCAT CATCTCGCTG ACATCAGGCT GCAACTGGAT CGAAGTCAGC GACGAGGGAC CGGGCATCCC CGCCGATATG GAGGATCGGA TATTCGAGCC GTTCTTCAAG CGCCATCACG ACGGACGCGG TGCCGGCCTC GGTCTCAACC TTGTTCGCGA CATCCTGCGC ATGCACGGCG GCGAGGTGAC GATCAACAAT CGCAGTCCTG GCGCGGTCTG CCGGCTGCGC TTCCCGCCGG ACAAATCGGC AGGCGTTTAT ACCCCATCGC ATCTGGCTAC TGCATAA
|
Protein sequence | MSKRCSYSLR KRLFWRLLAV QSVVLILVMI VLISVGKISE FRSTEGTIEV LGQAVFRQPT GELSLRETED LRQLRKDAPD LWYTIRDLQG HVLTEGLVPE EYAAIGNTLD HVGQAKFGSN LDDHDRPAAR MKWIATDGGQ LQFLTGTGPN SSTFILLKLS LVLAKIVIPI VAVMALGALI ATPLVVRRSL VGIDQAALQA DTIDIDQRGG RLSENDTPEE IAPLVHAVNR ALGRLDEGYE RQERFLTDAA HELRTPIAIL NTRIGSLPHS SIKTDLLEDA ARLAVLTEQM LDLQRLKQGK VQFIKIDLGQ LARKVIIEMA PLAFAAGYTV QFDVDGAGEI EGDPLALQRA LMNILQNAIN HGGRKGIISL TSGCNWIEVS DEGPGIPADM EDRIFEPFFK RHHDGRGAGL GLNLVRDILR MHGGEVTINN RSPGAVCRLR FPPDKSAGVY TPSHLATA
|
| |