Gene Rleg_6600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6600 
Symbol 
ID8022850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp25541 
End bp26917 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID644833469 
Producthistidine kinase 
Protein accessionYP_002984603 
Protein GI241666519 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000947222 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAAC GATGCTCCTA TTCGCTGCGC AAGCGCCTGT TCTGGCGGCT CCTTGCCGTC 
CAATCGGTCG TCCTCATCCT GGTGATGATC GTGCTGATTT CGGTTGGCAA GATATCCGAA
TTCAGGTCGA CGGAGGGCAC GATCGAGGTC CTGGGCCAGG CCGTGTTCCG CCAGCCCACC
GGAGAATTGA GCCTGAGGGA GACCGAGGAT CTGCGACAGC TGCGCAAGGA CGCGCCCGAT
CTCTGGTACA CCATACGCGA CCTGCAGGGT CATGTTTTGA CCGAGGGCCT GGTTCCGGAA
GAATACGCTG CAATCGGCAA CACGCTCGAT CATGTCGGCC AGGCCAAATT CGGCTCGAAT
CTCGACGACC ACGACCGTCC GGCTGCCCGA ATGAAGTGGA TTGCCACGGA TGGGGGACAG
TTGCAGTTTC TGACGGGCAC CGGCCCAAAC TCGTCCACCT TCATCCTGCT CAAGCTTTCG
CTGGTCCTTG CGAAAATTGT TATTCCGATC GTCGCAGTGA TGGCGTTGGG TGCGTTGATC
GCGACGCCGC TGGTCGTGCG AAGGTCGCTG GTCGGGATCG ACCAGGCCGC GCTCCAGGCC
GATACGATCG ATATCGACCA GCGTGGCGGG CGGCTGTCGG AAAACGATAC TCCCGAAGAG
ATCGCGCCGC TGGTGCATGC CGTCAACCGC GCGCTCGGCC GTCTCGACGA GGGTTATGAG
CGGCAGGAAC GGTTTCTGAC CGATGCCGCC CATGAACTGC GCACACCGAT CGCCATCCTG
AACACGAGAA TTGGATCCCT GCCGCACAGT TCAATCAAGA CCGACCTGTT GGAAGATGCC
GCAAGGCTTG CGGTTCTCAC CGAGCAGATG CTCGATCTTC AGCGACTGAA ACAGGGCAAG
GTCCAGTTCA TCAAGATCGA TCTCGGCCAA CTGGCGAGGA AGGTCATCAT CGAGATGGCG
CCACTGGCCT TTGCCGCCGG TTACACGGTG CAGTTCGATG TCGACGGCGC CGGCGAGATC
GAGGGCGATC CCCTGGCGCT GCAGCGCGCC CTGATGAACA TCCTGCAGAA CGCGATCAAC
CACGGCGGCA GGAAAGGCAT CATCTCGCTG ACATCAGGCT GCAACTGGAT CGAAGTCAGC
GACGAGGGAC CGGGCATCCC CGCCGATATG GAGGATCGGA TATTCGAGCC GTTCTTCAAG
CGCCATCACG ACGGACGCGG TGCCGGCCTC GGTCTCAACC TTGTTCGCGA CATCCTGCGC
ATGCACGGCG GCGAGGTGAC GATCAACAAT CGCAGTCCTG GCGCGGTCTG CCGGCTGCGC
TTCCCGCCGG ACAAATCGGC AGGCGTTTAT ACCCCATCGC ATCTGGCTAC TGCATAA
 
Protein sequence
MSKRCSYSLR KRLFWRLLAV QSVVLILVMI VLISVGKISE FRSTEGTIEV LGQAVFRQPT 
GELSLRETED LRQLRKDAPD LWYTIRDLQG HVLTEGLVPE EYAAIGNTLD HVGQAKFGSN
LDDHDRPAAR MKWIATDGGQ LQFLTGTGPN SSTFILLKLS LVLAKIVIPI VAVMALGALI
ATPLVVRRSL VGIDQAALQA DTIDIDQRGG RLSENDTPEE IAPLVHAVNR ALGRLDEGYE
RQERFLTDAA HELRTPIAIL NTRIGSLPHS SIKTDLLEDA ARLAVLTEQM LDLQRLKQGK
VQFIKIDLGQ LARKVIIEMA PLAFAAGYTV QFDVDGAGEI EGDPLALQRA LMNILQNAIN
HGGRKGIISL TSGCNWIEVS DEGPGIPADM EDRIFEPFFK RHHDGRGAGL GLNLVRDILR
MHGGEVTINN RSPGAVCRLR FPPDKSAGVY TPSHLATA