Gene Rleg_6585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6585 
Symbol 
ID8022835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp11721 
End bp12323 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID644833454 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_002984588 
Protein GI241666504 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00458703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTC AAACGAGCAT TCTCGGGCGC ATGAGCGGTT TTCTCTACCG CTGCCGAGCC 
GATGAAAACT ACACGATGCT TGAGATGACC AACGGCATCG AGCGCATCTT CGGTTATCCC
GTCGATGAAA TCGTCGGCAA CCGCACGCGA ACCTTCACCT CGATCATGTA CGAGGAAGAC
GTGCCTTTGA TGGATGAGAT CGTCGGACGG GCGCTGGAGA AGCGCACGGA CTGGACGATG
GAGTATCGCA TCCGCCACGC CATGGGGCAT CTCATCTGGG TCACCGAGAC AGGCGGCGGT
ATCTGGAACG AGAAGGGCGA GCTTCTCTAT CTCGAAGGCA GCATCATCAA CATCGAATCG
CTCTATCAGC GAATCGATGA ACAGACCTCC GGCATGCGCG TCACCGCCTC GAAGACCAAT
GAGATCCTGC AATCGCTGCG TTACCTGAAG CTGCTCGCCG TCAATGCCGG CATCGAGGCC
GCCCGCGCCG GCACGGCCGG ATCGGGCTTT GCCGTGCTGG CCGCAGAAAT GCGCACGCTC
GCCAACTCCT CGGAAGAGGC CGCACGCGCC ATTTCCAACG CACAACGCAA GGCGGAAGGC
TGA
 
Protein sequence
MDFQTSILGR MSGFLYRCRA DENYTMLEMT NGIERIFGYP VDEIVGNRTR TFTSIMYEED 
VPLMDEIVGR ALEKRTDWTM EYRIRHAMGH LIWVTETGGG IWNEKGELLY LEGSIINIES
LYQRIDEQTS GMRVTASKTN EILQSLRYLK LLAVNAGIEA ARAGTAGSGF AVLAAEMRTL
ANSSEEAARA ISNAQRKAEG