| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6576 |
|---|
| Symbol | |
|---|
| ID | 8022826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | + |
|---|
| Start bp | 1799 |
|---|
| End bp | 2485 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644833445 |
|---|
| Product | glutamate synthase alpha subunit domain protein |
|---|
| Protein accession | YP_002984579 |
|---|
| Protein GI | 241666495 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0070] Glutamate synthase domain 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.026671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCA TTGATCTTGC CACTACGCCG TTGCGTGAAC TCAACAGCGC CCTGCACAAC
ATCCAGAACG GTTCGAACGA TCTTTCCTTC GAAGTCGTCA ATCCGCGCGG CAGCCATTCG
GTTGCCGTCG GCATCGATGC GCCCGTCACG GTCGATGTGA AGGGGTCGGT CGGCTATTAC
TGCGCCGGGA TGAACGACGG CGGGACCGTC ACGGTTCACG GTTCGGCAGG TCCGGGTGTT
GCAGAAAACA TGATGTCTGG AACCGTCCTC ATCGAGGGTG ATGCCAGCCA GTATGCCGGC
GCAACCGGCC GCGGCGGCCT CCTTGTCATC AAGGGCAATG CGGCATCGCG CTGCGGCATC
TCGATGAAGG GCATCGACAT CGTCGTTCAT GGCAATATCG GCCATATGTC GGCCTTCATG
GGCCAGTCCG GCCACCTCGT GGTGCTGGGC AATGCTGGCG ATGCGCTTGG GGATTCGCTC
TACGAGGCGA AGCTCTTCGT GCGCGGTTCG GTCAAGAGCC TGGGTGCCGA TTGCATCGAA
AAGGAGCTGC GTCCCGAGCA TCTGACGAAG CTGGCCGAAC TTCTCGAAAA GGCGGGTGTG
ACCGAAGTGA GGCCCGAGGA ATTCAAGCGT TACGGCTCGG CCCGCAAGCT CTATAATTTC
AATATCGACA ACGCCGACGC GTATTAA
|
|---|
| Protein sequence | MPVIDLATTP LRELNSALHN IQNGSNDLSF EVVNPRGSHS VAVGIDAPVT VDVKGSVGYY
CAGMNDGGTV TVHGSAGPGV AENMMSGTVL IEGDASQYAG ATGRGGLLVI KGNAASRCGI
SMKGIDIVVH GNIGHMSAFM GQSGHLVVLG NAGDALGDSL YEAKLFVRGS VKSLGADCIE
KELRPEHLTK LAELLEKAGV TEVRPEEFKR YGSARKLYNF NIDNADAY
|
|---|
| |