Gene Rpic12D_4650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4650 
Symbol 
ID8022344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1309069 
End bp1310097 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID644833427 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002984561 
Protein GI241666202 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0286073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCC CCGCCGCTTC TGCGCACTCA AGACATGGCC CGCCAGTCGC ACGCCAGCAG 
TCTTCCCATG TGGTGCATTC CGGCGACGTC CGGCTGTTTG CGCGCATGAC GCAGCCCGAC
GAGGCGGCCG CACGGCAGCG CCCGGCCGTC ATCCTTGTGC ACGGTTATCC GGATGACAGT
TCCGTCTGGA ATGGTGTGCG CGACGCATTG GCGCGCCATT GCCGCGTCCT CACGTTCGAT
GTGCGTGGCG CAGGCCTGTC GGATGCGCCG ACCGACACCG CTGCCTACCG CATTGCGCAG
TTCGTGGATG ACCTCGCCGC GGTGGCGGAC CTGCTGTTGC CCGGCGAGCG ATTTCACCTG
GTCGGCCACG ACTGGGGTTC CATCCACAGT TGGGAATCCG TGACGACCGA TCGGTTACGC
GGGCGCATCG CGTCGTACAC GTCGATTTCC GGACCATGCC TCGATCACGT CGGCCACTGG
ATGCGCAGCC AGCTTGATGT CGGCACATGG GCAGCGAAGC GCGCTGTCTG GAAGCAACGG
CTGCAGTCAT GGTATGTCGG CTATTTCCAC TTGCCGTGGG TGCCGGAATG GTCATGGCGC
CTGTGGGCCG CACGTGCGTG GCCGTGGTGG TTGCGCCAGA CGGAAGGCGT GCACGGCGCG
GGGCGGCGGC CATCCCTGAC GCGCGATGCG TGCAACGGTC TGTGGATGTA TCGCGCCAAC
TTTCGCGAGC GGCTGGCCCA CCCGCAGGTA CGCGCGCCGC ACGCCCCCGT GCAGTTGATC
GTACCAACCC ACGACCGCTA CGTGAGCCCT GCCGTCACGC GCGCGGTCGA AGCGTGGGTA
TCGCACTATT GGCGGCACGA AATCGATGCA GGCCACTGGC TGCCGATGCG CCGTCCCGAG
TGGGTGGCCG ATTGCATCCG CCGGTTTGCC GACTACGTGG ACTCCGGACA CGAACCCGCT
GCGCTGCAAC AAGCGCGCGT ACCCGGGGTG TCCGCCGCAT TAGAAGATCC TGTCCAACGC
AAACGTTGA
 
Protein sequence
MSAPAASAHS RHGPPVARQQ SSHVVHSGDV RLFARMTQPD EAAARQRPAV ILVHGYPDDS 
SVWNGVRDAL ARHCRVLTFD VRGAGLSDAP TDTAAYRIAQ FVDDLAAVAD LLLPGERFHL
VGHDWGSIHS WESVTTDRLR GRIASYTSIS GPCLDHVGHW MRSQLDVGTW AAKRAVWKQR
LQSWYVGYFH LPWVPEWSWR LWAARAWPWW LRQTEGVHGA GRRPSLTRDA CNGLWMYRAN
FRERLAHPQV RAPHAPVQLI VPTHDRYVSP AVTRAVEAWV SHYWRHEIDA GHWLPMRRPE
WVADCIRRFA DYVDSGHEPA ALQQARVPGV SAALEDPVQR KR