Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4649 |
Symbol | |
ID | 8022343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1308024 |
End bp | 1308959 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644833426 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002984560 |
Protein GI | 241666201 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.365912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0278568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACG ATTTGGCTCT CTTTGTTTCC ATCGTGGACC ACGGCAGCCT GCAGGCCGCG GCCCGTCATG CCAACCTGCC GCCCGCCACG CTCACGCGGC GCCTGCAGAA GCTCGAGACA GCGCTTGGTT GCCAGCTTCT GCTGCGCAGC GCCCGCAGCC TGAAGCCCAC GCCGGAAGGC CAGCTTTATT ACGAGCAATG CCGCCCGCTG CTGACCGCGC TTGCGCAAAC CACAGCCACG CTCGACGACG ATCTCAACCA GGTGAAGGGC ACCCTGCGCG TGCTGGCACC GCTGAACCTG TCGCGCGGCC TGTTTGCGCC CGCCTATGCG AGTTTCATGG CGATGTGGCC CGAGATCCGG CTGGAGCTGT CGCTGAGCAA CCGCAATGAA GACGTGTGGC GGCACGGCGC TGATCTCGCC ATCCGTGTCG GCCAGCAGGA TGACCCGAAG CTGCGGCAGC GCCGGCTGGG CGTAATCGGG ATCGTACTGG TGGCGTCGCC AGCCTACGTG GCGGCACACG GCATGCCGGC ACACCCGCGT GATCTGGCGG CGCATCGGCT GCTGGTGGCG TCGCCCATCT CCACCTGGCG CTTCACGTCG CCCGACGGCA AAGAGACCAT CGAAATGCAG CCCGAAGCCC AATGCGAGGT GAACGATATT GAAATGGCAG CCGCCCTCGC GGAAGCCGGG CAAGGGCTGC TGTATTGCCC GCGCACCCTA TGCCATCGGG CGCTGGAGGC CGGCCAACTG GTGCGCGCCC TGCCTGATTG GCGCACACCG CAGCGCCCGA TCTATGCTGT GTGGCCGCAG CAACAACTGC CCCGCAAGGT GCGAACCTTG CTGGAGCATC TGGCCGAGTT CGCAGCGGCA AACCCGCTGC TGCAGGACTA TCCCGACGCG ACAGCCTCAT CGCTCGCACA CCCGCACACG GTGTGA
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Protein sequence | MLDDLALFVS IVDHGSLQAA ARHANLPPAT LTRRLQKLET ALGCQLLLRS ARSLKPTPEG QLYYEQCRPL LTALAQTTAT LDDDLNQVKG TLRVLAPLNL SRGLFAPAYA SFMAMWPEIR LELSLSNRNE DVWRHGADLA IRVGQQDDPK LRQRRLGVIG IVLVASPAYV AAHGMPAHPR DLAAHRLLVA SPISTWRFTS PDGKETIEMQ PEAQCEVNDI EMAAALAEAG QGLLYCPRTL CHRALEAGQL VRALPDWRTP QRPIYAVWPQ QQLPRKVRTL LEHLAEFAAA NPLLQDYPDA TASSLAHPHT V
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