Gene Rpic12D_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4646 
Symbol 
ID8022340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1306171 
End bp1306647 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID644833423 
Productprotein of unknown function DUF1348 
Protein accessionYP_002984557 
Protein GI241666198 
COG category[S] Function unknown 
COG ID[COG3558] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.350473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0402435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA ATGAAACCCG CCCGCCGGTT CCGCCGTTCA CCTTTGAATC TGCCGCCGAA 
AAGGTGCGTC TGGCCGAAGA CGGCTGGAAC AGCCGCAACC CGGAGCGCGT CGCGCTCGCG
TACACGCCGG ATAGCCAGTG GCGCAACCGC GCCGAGTTCG TCAACGGGCG CGAACAGATC
GTCGAGTTCC TCACGCGCAA GTGGCGCAAG GAACTCGACT ACCGCCTGAT CAAGGAACTG
TGGGCCTTTG GCGGCAACCG CATCGCCGTG CGCTTTTCCT ATGAGTGGCA TGACGATTCA
GGCAACTGGT ACCGCTCATA TGGCAACGAG AACTGGGAGT TTGACGAGCA CGGCGTGATG
CAGCGCCGCT ATGCCTGCAT CAATGACCTG CCGATCCAGG CGGAGGAGCG TAAGTTCTTC
TGGCCGCTTG GGCGTCGCCC GGACGATCAC CCGGGGTTGT CTGCGCTGGG TTTGTGA
 
Protein sequence
MSANETRPPV PPFTFESAAE KVRLAEDGWN SRNPERVALA YTPDSQWRNR AEFVNGREQI 
VEFLTRKWRK ELDYRLIKEL WAFGGNRIAV RFSYEWHDDS GNWYRSYGNE NWEFDEHGVM
QRRYACINDL PIQAEERKFF WPLGRRPDDH PGLSALGL