| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4641 |
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| Symbol | |
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| ID | 8022335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1302663 |
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| End bp | 1303436 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833418 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002984552 |
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| Protein GI | 241666193 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.299413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.128301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGC GCAATTCAAC CGCCGGGCTG CTGGCTGGCC GCAAGGTGCT CGTGACGGGC
GCCGCGCGCG GTCTGGGGCT GGCCTTTGCC AAGTCGATCG CCGAAGCCGG TGGCGCTGTC
GCGCTGGCCG ACATTCTTGG CGAGCGCGTG CAGGAAGAGG CGGCGGCGCT GCGTGCGGCA
GGTTTCGATG CGCATGGCTT CACGCTTGAT CTTGGCGATC CGGCTTCGAT TCAGGCGTGC
GCTGCGGCAG CGGCGCAGGC ATTGGGCGGG CTCGACGGTC TTGTCAACAA CGCGGCCATT
ACCAACTCGG GCGGGCGCGA CGCATCGTCG ATCGACATCG AGACCTGGGA CCGCGTGATG
AACGTCAACG TGCGCGGCAC ATGGTTGATG ACGACGGCTT GCCTGCCGGC ACTCAAGGCA
TCGGGCCGCG GCGCCATCGT CAATTTGTCG TCGGACACAC CGCTGTGGGG CGCGCCGAAC
CTGTTGGCTT ACGTGGCCAG CAAGAGCGCT GTCATCGGCA TGACGAAGTC TCTGGCGCGC
GAATGCGGCG CAGACGGCAT CACCGTCAAC GCCATCGCGC CGGGCCTGAC GCTGGTGGAA
GCCACCGAAT ACGTGCCGGC GCACCGCCAT GCGCTGTACC GCGACCAGCG CGCCATTTCG
CGCGATCAAC TGCCGGACGA CGTGTGCGGC GCCGTGCTGT TCGCGCTGTC CGACCTTTCC
CGATTCGTGA CGGGCCAGAC GCTGGCCGTC AACGGCGGTT TTGTCATGCA GTAA
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| Protein sequence | MPERNSTAGL LAGRKVLVTG AARGLGLAFA KSIAEAGGAV ALADILGERV QEEAAALRAA
GFDAHGFTLD LGDPASIQAC AAAAAQALGG LDGLVNNAAI TNSGGRDASS IDIETWDRVM
NVNVRGTWLM TTACLPALKA SGRGAIVNLS SDTPLWGAPN LLAYVASKSA VIGMTKSLAR
ECGADGITVN AIAPGLTLVE ATEYVPAHRH ALYRDQRAIS RDQLPDDVCG AVLFALSDLS
RFVTGQTLAV NGGFVMQ
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