Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4639 |
Symbol | |
ID | 8022333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1301187 |
End bp | 1302089 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833416 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_002984550 |
Protein GI | 241666191 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.123647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC AGGCTGTCAT GTCTTCCCAC CCGTTCCGTG TTGCCGACGC GCTTGCCGCG CTGGGCGCCG GGTTTGCCGA ACGCACCGTC GCCATCAACG CGCACGGCGA TCGCATCGGC TATCGGCAAT GGGGCGAGCG CGGGCCGGTG GTGGTGCTGT TGCACGGCAT CAGCTCCAGC GCCGCGTCAT GGCTGCCTTG CGCGCAGGTT CTTTCGCACA ACATGCGCGT GCTGGCATGG GATGCGCCGG GCTACGGCAA TTCCACGCCG CTTGCAGAGG GTGCACCGCG CGCTGCCGAT TACGCGGTGC GGTTGCAGGC ATGGGTTGCC GCGTTGGATG TGACGCCCGA TGCGATCGTC GGTCATTCGC TGGGCGCGCT GATGGCATCG GCGTATGTGG CCGCCGCGCC AGCCGCGATG CAGCCGAAGT GCCTGCTGCT TCTGAACCCC GCGCAGGGCT ACGGCCAAGC GGGGCAGGAG GACAAGTCCC GCAGCGTGCA GGCCCAGCGG CTTGCAACGC TCGACCAGCT TGGCATCGAC GGCATGGCGG AGTCGCACCA CGCACACCTG CTGCGCCCAG ATGCCACCGA CGAAGAACGC GCCTGGGTGC GCTGGAACAT GAAGCGCCTC AACGACGGTG GTTATCGCCA GGCTGTGGCG ATGCTCAGCG GCGACGACAT CGGCGCCTAT CTGAAAAAAC GCCCCGAATC GACGCTAGCG CAGATCGCTT GCGGCGATGT CGACGGCATT ACACCACCGG AAGGTTGCGA AGCGCTGGCA AAGATGTTTG ATCTGCCGTT TGCGCTTGTG CCGTCGGCCG GGCATGCCTC TTATATCGAT GCGCCTGACG CTGTTGCAGG CTGGATCGAA CACGCTGTTC TCTCCCAATC CCAAAACGCC TAA
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Protein sequence | MSVQAVMSSH PFRVADALAA LGAGFAERTV AINAHGDRIG YRQWGERGPV VVLLHGISSS AASWLPCAQV LSHNMRVLAW DAPGYGNSTP LAEGAPRAAD YAVRLQAWVA ALDVTPDAIV GHSLGALMAS AYVAAAPAAM QPKCLLLLNP AQGYGQAGQE DKSRSVQAQR LATLDQLGID GMAESHHAHL LRPDATDEER AWVRWNMKRL NDGGYRQAVA MLSGDDIGAY LKKRPESTLA QIACGDVDGI TPPEGCEALA KMFDLPFALV PSAGHASYID APDAVAGWIE HAVLSQSQNA
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