Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4638 |
Symbol | |
ID | 8022332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1300347 |
End bp | 1301174 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833415 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002984549 |
Protein GI | 241666190 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.214771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0505557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG ACCTCATCCC AGAAGACGTG CAAGAAAAGT ACATCGTGCC GGGGCTCGAA CGCGGCCTGC GCCTGCTGTG CGAGTTCAGC CACAAAGACC GTGTGCTGTC GGCGCCGGAA CTGGCGCGCC GCCTGAAGGT GCCGCGCTCC ACGGTGTTCC GCCTGCTGAC CACACTTGAA GTGATGGGTT TTATCGAACG CGTCGACGGC GGCCGCGATT TTCGCCTCGG CATGGCGGTG CTGCGCCTGG GCTTTGAATA TCTCGCGTCG CTGGAATTGA CCGAGCTGGG CCGCCCGCTG CTCGATCGTC TGCGCGACGA GATTCACTAT CCGTGCAACC TCGTCGTGCG CGATGGCCGC TCGATCGTCT ACGTGGCGAA ATCCGTGGCG CCCACGCCGT TCACCAGCTC GGTGAATGTC GGCACGCGCC TGCCGGCGCA CGCCACGGTG CTGGGTCGTG TGCTGCTGGC CGATCTGTCG CTGGCTGAGC TGCGCCAGCT CTATCCGGAG CCGCAGCTGG AAGTGTTTTC CGCCAATACC CCGCGCACGG TCGAAGAGCT GTTCGAGATG GTCCAGCGCG ACCGCGAACA CGGCTACGTG CTGCAGGAAG GTTTCTTCGA AGCCAACATC TCGACGATTG CTGCGCCGGT GCTCGACCGC GCCGGCAAGG TGGTAGCAGC CCTCGGCACG ACGATTCCGT CGCCGCGCAT TGAAGCCGCA CAGCTCGATC TGATGATCGA CAAGGTGCGC GCCGCTGCCG GCGAGCTGTC TTACCTGCTG GACTACCGCC CCGCAGGCGG CAAGGTCGTC AACCTGTTCC GCGAATGA
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Protein sequence | MSNDLIPEDV QEKYIVPGLE RGLRLLCEFS HKDRVLSAPE LARRLKVPRS TVFRLLTTLE VMGFIERVDG GRDFRLGMAV LRLGFEYLAS LELTELGRPL LDRLRDEIHY PCNLVVRDGR SIVYVAKSVA PTPFTSSVNV GTRLPAHATV LGRVLLADLS LAELRQLYPE PQLEVFSANT PRTVEELFEM VQRDREHGYV LQEGFFEANI STIAAPVLDR AGKVVAALGT TIPSPRIEAA QLDLMIDKVR AAAGELSYLL DYRPAGGKVV NLFRE
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