| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4634 |
|---|
| Symbol | |
|---|
| ID | 8022328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 1295454 |
|---|
| End bp | 1296956 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644833411 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_002984545 |
|---|
| Protein GI | 241666186 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.20636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0898533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCT CTACCCTGAA CGCAACTGCG ACCTCGTTGC TGCCGATCTG CATCGCAGGC
GAATGGCGCC TCGGCACCGG CGAGCGCTAT GTCACGCGCT ACCCCGCCAC GGGCGAAGTG
GTGGCGGAAC TCAACGCTGC CAGCGTCGCC GACGTGGAAG AAGCTGTGGC CGGTGCCTAT
CGCGCCTTCC TCTCCAGCGG CTGGGCGCAG CGCAAGCCGC ACGAACGCGC CGCCGTCCTG
TACCGCATCG CCGAGCTGAT CCGCTCGCGC AGCGAAGCAC TTGCGCAACG CCAGCGGCTG
GATAACGGCA AGCCGATCAA CGAAACGCGC GCCCTGGTGG CAAGCGCTGC GGCCACGTTC
CAGTTCTTCG GCGCCGCATG CGAGACACTG GAAGAGTCGC TCACGCCCAT GCGCGGCGAT
TGCCTGACGA TGAGCGTGCA TGAGCCCATG GGCGTGGTGG CGGCCATCAC GCCATGGAAT
TCGCCGATTG CCAGCGAAGC GCAAAAGATG GCGCCTGCGC TGGCCGCGGG CAACGCCGTC
GTCGTCAAAC CGGCTGAAGT CACACCGCTG ATGGCACTGG AACTTGCCGC CATCTGTGAA
GAGGCGGGCG TGCCGAAGGG CATGATCAGC GTGCTGCCCG GCAAGGGCTC CGTGATTGGC
GATGCGATCA CCAAGCATCC GCTGGTGCGT CGCGTGTCGT TCACGGGAGG CACGAACACG
GGCCGCCATA TCGCGCACAT TGCGGCCGAC AAGATGATGC CGGTGTCGCT CGAACTCGGC
GGTAAATCGC CGACGATGGT GTTTGAAGAT GCCGACCTCG ACCACGCCGT GAATGGCGTG
CTGTACGGCA TCTTCAGTTC ATCGGGCGAA TCGTGCATCG CAGGTTCGCG CCTGTTTGTG
GCGCGCTCGC TCTACGAGCC GTTCATGGAT CGTCTGGCCG CTGCCGCGGC ACGCCTGCGT
GTCGGCAATC CGGCCGATGA ATCGACGCAG ATGGGCCCGC TGATCACCGA TCGTCACCGC
GAGACCATCG AGTCGTACGT TGCGATGGGC GTGGGAGAGG GCGGCCACCT GCGCACGGGC
GGCTTGCGCC CAGCAATCGT GGGCTGTGAG TCGGGTTACT TCTACACGCC GACCATCATC
GAAGGGCTCA CCAACAGCGC GCGCATTTGC CAGGAAGAAA TCTTTGGCCC GGTGCTCGTC
GCCATGCCGT TCGACGATGA AGACGAATTG ATCGAACAGG CCAACGACAG CGTCTACGCA
TTGGCCGCCG GGATCTGGAC GCGCGACTAC AAGCGCGCAT GGCGCATCGG CCGCGCGGTG
CAGGCCGGCA ACGTGTGGAT CAACACATAC AAGCAGTTCT CGATCTCGAC GCCGTTTGGC
GGCTGGCGCG ACAGCGGCCT CGGCCGCGAG AAGGGCCGAC TCGGCATCCT GCAATACATG
GAGCAGAAGA GCCTTTACTG GGGCTTGAAT GAACAGCCGC TGGCCTGGGC CAACGCCAAC
TGA
|
|---|
| Protein sequence | MTVSTLNATA TSLLPICIAG EWRLGTGERY VTRYPATGEV VAELNAASVA DVEEAVAGAY
RAFLSSGWAQ RKPHERAAVL YRIAELIRSR SEALAQRQRL DNGKPINETR ALVASAAATF
QFFGAACETL EESLTPMRGD CLTMSVHEPM GVVAAITPWN SPIASEAQKM APALAAGNAV
VVKPAEVTPL MALELAAICE EAGVPKGMIS VLPGKGSVIG DAITKHPLVR RVSFTGGTNT
GRHIAHIAAD KMMPVSLELG GKSPTMVFED ADLDHAVNGV LYGIFSSSGE SCIAGSRLFV
ARSLYEPFMD RLAAAAARLR VGNPADESTQ MGPLITDRHR ETIESYVAMG VGEGGHLRTG
GLRPAIVGCE SGYFYTPTII EGLTNSARIC QEEIFGPVLV AMPFDDEDEL IEQANDSVYA
LAAGIWTRDY KRAWRIGRAV QAGNVWINTY KQFSISTPFG GWRDSGLGRE KGRLGILQYM
EQKSLYWGLN EQPLAWANAN
|
|---|
| |