Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4630 |
Symbol | |
ID | 8022324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1290731 |
End bp | 1292134 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833407 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002984541 |
Protein GI | 241666182 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.234892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00910919 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCCAG GTGTTTTGAT TGATAGCGGA ATTGACCACG ATGCGTCGCT GGGCGCGATG AGCCTGGGCA AGATCGTTGC CCGCATCGAG CGGCTCAAGA GCAACGGCAT GCACGTGCGT GCGCGTCTGC TGATCGGGCT GGCGACGTTC TTCGACGGCT TTGACGTGAT CGTCATTGCC GCTACGCTGC CGCTGCTGAT CGCGCAATGG CATCTGACCC CGGCGCAGAT TGCTTTTGTG ATCGGTGCCC CCGGCATCGG TCAGTTGATC GGTGCGCTGG TGTTCCCGAT GTTTGCGGAG CGATTCGGCC GCGTGCGCAT GATCGGCTAT AGCGCGGGCA TCATCGGTTT GATGAGCCTG CTGTGCGGCG TGGCGCCCAG TTTTGCCGTG TTTGCAGCGC TGCGTATCGT GCAGGGCATC GGCTTGGGTG GCGAGCTGCC CGTAGCGGCC ACATACATCA ACGAAGTCAC GCGTGCCCAT GGCCGCGGGC GCTTCGTGCT GCTCTACGAG GTGGTGTTCC CGATTGGTTT GCTGGTGTCC AACGCGCTTG GGGCCTGGCT TGTACCGCAT TTCGGCTGGG AGGTGATGTA CTTTCTCGGT GGCATTCCGC TCGTGCTGTT CTTCACGCTG CCCAAGGCCG TGCCGGAGTC CCCGCGCTGG CTGGCGACCA ATGGACGCAT GGCCGAGGCC GATGCCGCGC AGGCACGCTT TGAAGCCAAG GCGAAGGGGC CGCTGCCTCC GCTGGGCGAT ACCTCGGCCT TCGAGCAGAT GTCGCACCGC CACCCGAAGC GCGGCATGCG CGATCTGTTC GGCCCCGTGT ACATCAAGCG CACGGTGGTC GTGGCCATGC TGTGGGCGAC GTGCGGTTTT ATCCAGTACG GTCTGTCGAC GTGGCTGCCG ACGGTCTACA AGACGATCTA TCACGCGCCG CTGCAACTGG CGCTGAATTT GGCCGCGCTG GCGTCGGTGC TGGGTGTGGT CGGCTCGTTG GTCTGCGCGA TGATCGTCGA CAAGGTAGGC CGCAAACCCG TGATGGTCGT GTCGTTCGTA CTCTGCGGCG TCTCGCTGGC GCTGGCTGGG CTGCTGCACG AGCAGTCGCT CTATGTGGTG GCGGGGTTGT GCTCGTTGGC GCTGGGGTTG ATGGCGTGCG GCTTCATCAC TGCCTATGTC TATACGCCGG AGCTGTACCC GACCAATATC CGGGCGATCG GCTGCGGCAT GGGCGGCGCG TGGCTGAAGA TTGCGGCCAT CTTTTCACCC ATGCTGATCG GATCGACCAT CGGCTCGGGC AACATCAGCA ATGCGTTCTT GCTGTTGGCT TTGGTGCCCA TCCTGGCGGC AGTCACTATC CACTTCCTCG GCATCGAAAC CAAGGGGAAA GTGCTGGAGC AGCTTGAGCT GTAA
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Protein sequence | MKPGVLIDSG IDHDASLGAM SLGKIVARIE RLKSNGMHVR ARLLIGLATF FDGFDVIVIA ATLPLLIAQW HLTPAQIAFV IGAPGIGQLI GALVFPMFAE RFGRVRMIGY SAGIIGLMSL LCGVAPSFAV FAALRIVQGI GLGGELPVAA TYINEVTRAH GRGRFVLLYE VVFPIGLLVS NALGAWLVPH FGWEVMYFLG GIPLVLFFTL PKAVPESPRW LATNGRMAEA DAAQARFEAK AKGPLPPLGD TSAFEQMSHR HPKRGMRDLF GPVYIKRTVV VAMLWATCGF IQYGLSTWLP TVYKTIYHAP LQLALNLAAL ASVLGVVGSL VCAMIVDKVG RKPVMVVSFV LCGVSLALAG LLHEQSLYVV AGLCSLALGL MACGFITAYV YTPELYPTNI RAIGCGMGGA WLKIAAIFSP MLIGSTIGSG NISNAFLLLA LVPILAAVTI HFLGIETKGK VLEQLEL
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