Gene Rpic12D_4627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4627 
Symbol 
ID8022321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1288840 
End bp1289358 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID644833404 
Productprotein of unknown function DUF985 
Protein accessionYP_002984538 
Protein GI241666179 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0728086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0128085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG CCCTCGCCGC CCAGAACCTC ATCGCCCGCC TCGGTCTCGA ACCGCACCCG 
GAAGGCGGCT TCTATCGCGA AACCTATCGC AGTGAGGAAC GCATCCAGCG AGGCATCCCG
CCCATCGGGC GTGCGGCTGC CACCGCTATC TATTACCTGT TGGCGGATGA TGCATATTCC
GCCTGGCATC GGATCCAGTC GGACGAGTTG TGGCACTTCC ATGCGGGGGA CTCACTCAAT
GTGCATGTGT TGGAGGAAGA CGGTACGGTG AGCACGCATC GCCTGGGCCA CGCGGCCGAC
GATGCGATGG CGGTGTACCA GGCGGTGGTC CCGGCTGGCC GCTGGTTTGC AGCCGAGCGC
GTGCCGGGTG AACATGGGTA TGCGCTGGTC GGCTGCACCG TCGCTCCGGG GTTCGAGTTC
AGCGAGTTCG AACTGGCTGA CGGCGATGCG CTGCTGGCGA AGTATTCGGC ACATGGCGAT
CTCGTCCGCA GGTTGCTGCC CAAGCCCCAC GGCGCTTGA
 
Protein sequence
MPLALAAQNL IARLGLEPHP EGGFYRETYR SEERIQRGIP PIGRAAATAI YYLLADDAYS 
AWHRIQSDEL WHFHAGDSLN VHVLEEDGTV STHRLGHAAD DAMAVYQAVV PAGRWFAAER
VPGEHGYALV GCTVAPGFEF SEFELADGDA LLAKYSAHGD LVRRLLPKPH GA