| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4621 |
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| Symbol | dnaE2 |
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| ID | 8022309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1274094 |
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| End bp | 1277333 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644833393 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_002984533 |
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| Protein GI | 241666174 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0743632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.186746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGG CCACGCCTCT CCCCGTTCTG CCCGACTATG CCGAGCTGCA TTGCATCAGC
AACTTCACGT TCCTGACAGG CGCGTCGCAC CCGAGCGAAC TGGTGGAGCG CGCCAAACTT
TACGGTTATC AAGCACTGGC GCTGACTGAC GAATGCTCTG TAGCAGGCAC CGCGCGGGCG
CTTGTGGCTT CGAAGGAGCA CGAACTGAAG CTCATCATCG GCAGTCGCTT CACGGTGCGC
AATGCCGATG GCGAACCTTG GCTGCGGCTG GTGCTGCTGG CGCAGAACAT CGAGGGTTAC
GGCAACCTGA GCGAAATCAT CACGCACGCG CGGTTGGCCG CACCCAAGGG CGAATACCGC
TTGCTAGCTG ACGATTTGGC CTCGCCCCAA GGCGAACTCG CGCACCTGCG CGGCGCGCCC
GATTGCCTGG CGATTCTGCT GCCTGATTAC GATCCTGACC CGCAGCAACT GTTGGCTCAG
GCGTGGTGGT GCCAACGCGT GTTCGGGGAT CGGCTATCGA TTGCGCTGGA GTTGCCGCTG
CGGCACGCGG ATGACCGCCA TCGCGGTACG GTCTTGGCGG TGTCGGAACA GATCGATGTG
CCCATGGTCG CGACCGGCGG TGTTCAGATG CACACGCGCC AACGCAAACC GCTGCACGAC
GTGCTGACCG CCATCCGTCT ATCCAAGCCG CTTTCCGAGT GCGGTTTGGA ACTTGCGCCC
AGCGCTGAAC AAGCAATGCG CACGCGCATG CAGCTCGCGT TCCTCTATCA AGGCGAGGGT
GGCGAGAAGA TCCTGCGTCG CACGGTGGAG CTGGCCGCGT TGTGCAATTT TTCTCTCGAC
GAAATCGAAT ACGAATATCC GAGCGAAGTC GTGCCGGAAG GCATGACGCC GGCGGAATAC
CTGCGCGCCG AAACGTTCGC TGGCGCCGCG CGACGCTATC CGAATGGTGT GTCGGAGAAG
GTGCATGCGC AGATTGAGGA GGAACTCGGA CTGATTGCCG AGCTGGGGTA CGAGCCGTTT
TTCCTGACCG TCTATGACGT GGTGAAGTTC GCGCGCAACG AAGGGATTCT CTGCCAGGGG
CGAGGTTCGG CGGCCAACTC GGCGGTGTGC TATTGCCTGG GGATTACCGA GGTGAACCCG
GATAGCGGCA ACACGCTGTT CGCACGCTTT CTTTCGCGTG CGCGCAATGA GCCGCCCGAC
ATCGACGTCG ATTTCGAGCA TCAGCGTCGC GAAGAGGTCA TCCAGTACAT CTACAAAAAA
TACGGTGTGA CACGTACAGC GCTGGCAGCA GCGCTCATCA CTTACCGCAC GCGTAGCGCA
CTGCGTGACG TCGGTCGCGC GTTGGGTATC GACCTGGGCA TCGTCGAGCA GGTGGCCAAG
GGGCAGGCGT GGTGGGATAG CCGTAAGGAA TTTGCGCAGC GCGCAGGCCA GCAAGGTCTG
GATCCGGAAT CACCGTTGGT GCTGCGCTGG GCGCAACTGG TGGATCAGTT GCGTGGTTTT
CCGCGCCATC TGTCGCAGCA CGTGGGCGGG TTCGTGATTG CGCAGGGCAA GCTTTCGCGC
CTGGTGCCGA TCGAGAACGC CGCGATGGAA AACCGCCGCG TCATCCAGTG GGATAAAGAC
GATCTCGAAT CGCTGCGCCT GCTGAAGGTG GACGTACTGG CGCTGGGCAT GCTGACGGCC
ATTCGCCGCA CGTTGGACAT GGTCGATGCG TTGCCCGGGC GGCGCGAGCA CTACGGCGCG
ACGGCCAAGC TCGCCATGCA GAACCTGCCC GATGACGATA CCGAAACCTA CGACATGATC
TGCCGCGCCG AGACCATCGG CGTGTTCCAG ATCGAATCGC GTGCGCAGCA ATCGATGCTG
CCGCGTCTGC GTCCGCGCGA GTATTACGAC TTGGTGATCC AGGTGGCCAT CGTACGGCCG
GGGCCGATCC AGGGCGGCAT GGTCCACCCG TATCTGCAGC GGCGCGAGGC AAAGCGCAAT
GGCAACACCG ATTGCGTGAC CTACCCCGGC CCCGAGGTGA AAGCCGTGCT CGAACGCACG
CTGGGTGTGC CGATCTTCCA GGAGCAGGTG ATGGAGATCG CCATGAAGGC CGGCGATTTC
ACTGCGGATG ATGCTGACCG CCTGCGCCGC GACATGGCCG CCTGGAAGCG CAAGGGGAAT
CTCACGCAGC ATCAGGAGCG CCTGGTGCAT GCGATGGTCG TCAAGAGGCG CTACGACCCT
GCTTTTGTCG AAGCGCTGTG CAAACAGATG GAAGGTTTTG CCGAATACGG CTTCCCCGAA
AGCCACGCGG CAGGCTTTGC CAAGCTGGCT TACGTCAGCA GCTTCCTGAA ATGCCATGAG
CCGGCGGCGT TTTTTGCGGC GTTGCTCAAC AGTCAGCCGA TGGGGTTCTA TTCACCGTCG
CAACTGGTGC AGGAGGCGCG GCGCAGCCAT GTGCGTGTGC TGCCCGCGGA CGTGACGGCC
AGCGTATGGG ACAGTACGCT GCATCCCCGC GCCGATGGCG AGACCGGTGA AGATGGCCTA
GTGCAACCCG ATATCCGGCT CGGGTTGAAT CGCATTCGGG GCATGCGCAA GCCGGCTGCC
GAGCGTATCG AAGCGGCTCG CGCCCAAGCG CCATTTACGA GTGTGGAGGA TCTCGCCCAT
CGCGCCGCGC TCGACCGTCA CGACTTGAAC GTGCTGGCCG CCGCCAATGC GCTGAAGTCG
CTGGCCGGCC ACCGTCGTCA GGCGCTATGG CAAACGCTCG CACTGCAGGA GCCCGGCCAC
GATCACGCGC TGCTGCGCCA GGCTCGTCCG GTGGAAGCGC CGCTGGAACT GCCTGCACCG
CCCATAGGCG AAGAGGTGAT GGCGGATTAC GGCAGCCTGG GATTGTCGTT GCAGAGCCAT
CCGGTAGAGC TGCTGCGCGC ACGGCTCGAG CGCATGCGTT TCGCCACCGC CGCCACGCTG
GCCGGCTATC GCAACGGGCA ACTGGCGCGC GCTTGCGGCA TTGTCACGGT GCGGCAGCGG
CCGGGCACGG CCAACGGCAC GATCTTCGTT TCCATTGAAG ATGAGACGGG CGCCATCAAC
GTCATCCTCT GGCCGCACTT GATCGAGCGT CAGCGACGCG AAGTGCTGAA CGCCCAGTTG
CTGGGCGTCT ACGGTAAATG GCAATGTGAG CGCGAGACCC GACACCTTGT CGCCCAGCAT
CTGGTGGATC TGACCCCACT TCTGGGGCGC CTCGCCACTT CCAGCCGCGA CTTCCATTAA
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| Protein sequence | MTSATPLPVL PDYAELHCIS NFTFLTGASH PSELVERAKL YGYQALALTD ECSVAGTARA
LVASKEHELK LIIGSRFTVR NADGEPWLRL VLLAQNIEGY GNLSEIITHA RLAAPKGEYR
LLADDLASPQ GELAHLRGAP DCLAILLPDY DPDPQQLLAQ AWWCQRVFGD RLSIALELPL
RHADDRHRGT VLAVSEQIDV PMVATGGVQM HTRQRKPLHD VLTAIRLSKP LSECGLELAP
SAEQAMRTRM QLAFLYQGEG GEKILRRTVE LAALCNFSLD EIEYEYPSEV VPEGMTPAEY
LRAETFAGAA RRYPNGVSEK VHAQIEEELG LIAELGYEPF FLTVYDVVKF ARNEGILCQG
RGSAANSAVC YCLGITEVNP DSGNTLFARF LSRARNEPPD IDVDFEHQRR EEVIQYIYKK
YGVTRTALAA ALITYRTRSA LRDVGRALGI DLGIVEQVAK GQAWWDSRKE FAQRAGQQGL
DPESPLVLRW AQLVDQLRGF PRHLSQHVGG FVIAQGKLSR LVPIENAAME NRRVIQWDKD
DLESLRLLKV DVLALGMLTA IRRTLDMVDA LPGRREHYGA TAKLAMQNLP DDDTETYDMI
CRAETIGVFQ IESRAQQSML PRLRPREYYD LVIQVAIVRP GPIQGGMVHP YLQRREAKRN
GNTDCVTYPG PEVKAVLERT LGVPIFQEQV MEIAMKAGDF TADDADRLRR DMAAWKRKGN
LTQHQERLVH AMVVKRRYDP AFVEALCKQM EGFAEYGFPE SHAAGFAKLA YVSSFLKCHE
PAAFFAALLN SQPMGFYSPS QLVQEARRSH VRVLPADVTA SVWDSTLHPR ADGETGEDGL
VQPDIRLGLN RIRGMRKPAA ERIEAARAQA PFTSVEDLAH RAALDRHDLN VLAAANALKS
LAGHRRQALW QTLALQEPGH DHALLRQARP VEAPLELPAP PIGEEVMADY GSLGLSLQSH
PVELLRARLE RMRFATAATL AGYRNGQLAR ACGIVTVRQR PGTANGTIFV SIEDETGAIN
VILWPHLIER QRREVLNAQL LGVYGKWQCE RETRHLVAQH LVDLTPLLGR LATSSRDFH
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