| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4611 |
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| Symbol | |
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| ID | 8022299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1260751 |
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| End bp | 1261617 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644833383 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002984523 |
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| Protein GI | 241666164 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.144049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTCG CGCAGCTCAA ATCGTTCTTC ATGGTCGCCC GCCTGGGCAG CATCACGCTG
GCAGCCAAGC AACTTGGCCT GTCGCAGCCG ACCGTCACTT CGCAGATCCG CGCCCTGGAG
GAGGCTTATG GCGTGGAGCT GTTCTACCGG GGCGGGCGCC GGCTGACCCT GTCGGATGCC
GGTGTGCGGC TGATGCCGCT GGTGGACCAG CTCGTGCGCC AGGAAACCGA GATCGACTTC
TTTCTGCGCA ACTCCGGTGA CATGGGCTCG GGGCACCTGC GCATCGGCGC GACGGCGCCG
TATTACGTGC TCGACATCGT GGATCGCTTC TGCAAAAGCC ATCCCGGCAT CGACGTGAGC
ATCGAAGCCG GCAATTCGGT GCAGATGCTC GAAGCGCTGC AGGAGTACCG CGTTGACGTG
GCGTCGTCGT CGCAGCGCGT GGACGACGCG CGCTTTCTGC GCATTGAACT GGCACGCGAT
CCGCTGGTGC TGGTGGTGCA TCGCAACCAC GCGCTGGCCG ACCGGACGAG CGTGCCTGTG
AGCGTGCTGT CGCAATGCCG GCTGCTGGTG CGCGAAGTTG GATCGACCAC CCGCGCCATG
ACCGAAACGA TGATGGCCCA GGCAGGCGTC ACGCCGGCTT CCACGGTGGA GATCGGCAGC
CGGGAATCCA TCCGCGAGGC CATCACGCGC AACCTGGGCG TGAGCGTTAT CGCCCGCCAG
GAAGTGCCGA GCCACGCGGA TCTGCGTGTG CTCCCGTTCG AAGGCGGCGC GCCGGAGCTG
AGCGAATACT TGTACTGCCT GCAGGATCGG CGCGAGGCGC GGTTGATTGC GGCCTTCCTG
AGCGAAGTCC GGCCGGTTTC TTCATAG
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| Protein sequence | MLVAQLKSFF MVARLGSITL AAKQLGLSQP TVTSQIRALE EAYGVELFYR GGRRLTLSDA
GVRLMPLVDQ LVRQETEIDF FLRNSGDMGS GHLRIGATAP YYVLDIVDRF CKSHPGIDVS
IEAGNSVQML EALQEYRVDV ASSSQRVDDA RFLRIELARD PLVLVVHRNH ALADRTSVPV
SVLSQCRLLV REVGSTTRAM TETMMAQAGV TPASTVEIGS RESIREAITR NLGVSVIARQ
EVPSHADLRV LPFEGGAPEL SEYLYCLQDR REARLIAAFL SEVRPVSS
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