Gene Rpic12D_4601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4601 
Symbol 
ID8022289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1249308 
End bp1249880 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID644833373 
Productputative transmembrane protein 
Protein accessionYP_002984513 
Protein GI241666154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0346452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC CGCACGGCAC TGTCCGACGC GCCCGAAGAC CAGGCCCGCG CAGGTTATGT 
GCGGCGCTGG GCGCCGTGCT GGCTGGCGTG GTGTGCATGG GCGCCACGCA CGCGCAGATG
CAGGCCAGCG AGGTGCAGGT CAAGGCAGCG TTCATCTACA ACTTTGCGCT GTTCACCAAC
TGGCCGGCCG ATGCCATCCA GGCCGACGCC CCGATGGTGT TGTGCGTGAC AGCACAGCAT
CCGTTGCAGG CAGCCTTGGA AAAACTGACA GGAAAACCCG TGCGCGGACA CCGCCTGGAA
ATCCGAAAGA TCAATGACGG TACCGTTGCC GGCTGCCATG TCCTGGTGTT TGATGCGCGT
GCTTCGAACG GCGTGCGTGT CGATCCGGCC ACGCCCATGC TGACGGTGTC CGACAGCCCT
AAAAACCAGC GCGCACCCGG CAACCCCGAA CCGATGATCG CGTTGACGCT GCATGACGAT
CGCGTGGTCT TCGACATCGA TGCAGTGGCC GCGCGGCAAG CCCATCTGCA ACTCAGCTCA
CAACTGCTGC GCCTGGCGAG GACCGTGCAA TGA
 
Protein sequence
MNTPHGTVRR ARRPGPRRLC AALGAVLAGV VCMGATHAQM QASEVQVKAA FIYNFALFTN 
WPADAIQADA PMVLCVTAQH PLQAALEKLT GKPVRGHRLE IRKINDGTVA GCHVLVFDAR
ASNGVRVDPA TPMLTVSDSP KNQRAPGNPE PMIALTLHDD RVVFDIDAVA ARQAHLQLSS
QLLRLARTVQ