| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4598 |
|---|
| Symbol | |
|---|
| ID | 8022286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 1244375 |
|---|
| End bp | 1246024 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644833370 |
|---|
| Product | Rhodanese domain protein |
|---|
| Protein accession | YP_002984510 |
|---|
| Protein GI | 241666151 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.664806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA CCATCGACGC TATCGACGCC ATCGAATCGC CGGTCGCTGC ACCGCTGGCC
GAAACCCACG TCCCGACGTT GGCGTATGCC GACGTGCGCG CCGCCCTGCT GGCCCGCAAG
GAGATTGCAC TGGTCGACGT CCGCGAGGAA GACCCGTATG CCCAGGCGCA TCCGCTATGG
GCAGCCAACC TGCCGCTCTC CCGGCTGGAG TTGGAAGCGT GGTCGCGCAT TCCGCGCCGC
GACACGTTGA TCGTGCTGTA CGGCGTGCAC GATGGCGTGG ACCTCGCCCC GCGCGCGGCG
GCCAAGCTGG CTGAACTCGG CTATACGCGC GTGTACCTGC TCGAAGGCGG ACTCGATGGC
TGGCGCGCAG CCGGCGGCGA GGTGTTCCAA GACGTGAACG TGCCGAGCAA ATCCTTTGGC
GAATACGTGG AGGCGCACCG CCACACGCCG TCGCTCAGCG CGCAGGAGGT CAAGGCGCTG
CTTGATGCCA AGCGCGACGT GGTGATCGTC GATTCGCGCC GCTATGAAGA GTTTCAGACC
ATGAGCATCC CCACGGCGAC GAGCGTGCCG GGTGCCGAGC TGGTGTTGCG CATCCGCGAG
CTGGCACCGG ACCCGAGCAC GCAGGTCATC GTCAATTGCG CGGGACGCAC GCGCAGCATC
ATCGGCACGC AATCGCTGGT GAATGCCGGC ATCCCCAACC CGGTGGCGGC ACTGCGCAAT
GGCACCATCG GCTGGCTGCT GGCCGATCAG GTGCTGGACC ATGGCGCCAA CCGCCGTCAT
CCGCAGGACG TGTCTGCCGA ATCACGCGCG CAGGCACAGG CCGATGCGCG CGCCGTGGCC
GAACGCGCCA ACGTGCCGCG CATTGCGCTG GCTGAGGTTG CCAAACTCGA GACCCCGGAC
CGCACGGTCT ACAAGCTCGA CGTGCGCACA CCCGAGGAAT ATGCCACCGG CCACCTGCCC
GGCTTTGCCA GCGCGCCCGG CGGCCAGCTC GTGCAGGAAA CCGATCACAC CGCCGCCGTG
CGCGGCGCGC GCATCGTTCT GGCCGATGAC GACGGCGTGC GCGCCGACAT GTCCGCCTCG
TGGCTCGCAC AGATGGGCTG GGAGGTTTAT GTCGTCGATC CGGTCGACGC GAGCGCGCGC
AGCGTCACCG GGACGTGGCA GACACCTGCC CCGCCGCTCC CCGCCGTGCG CACGGTCGAC
GCCCGCGCCC TGGCCGGCTG GCTGGAAGCG GGCGACACCG CCGTCATCGA CGTCACGCGC
AGCGCCAACT ACGTTGCGCG GCATATTCCG GGTGCGTGGT TTGCTGTACG CTCAGACTTG
CCCGCAGCGC TGGCGCGCAT CCCGGCGGCC CGCCGCTACG TGCTGACGTG CGGCTCCAGC
CAGCTCGCCC GCTTTGCCGC CGCCGACCTT GCCAAGCTGA CGCAGGCCGA GGTGTGGGTG
CTCGACGGAG GCACTGCAAC ATGGGTGGCC GCCGGCCTGC CCATTGAAAC CGGCGAGACC
CGCCTGGCCT CAGACCGCAT CGACCGCTAC CGCCGCCCGT ATGAAGGCAC GAGCGCACCG
CGTACCGCGA TGCAGGCCTA TCTCGATTGG GAGTTCGGGC TGGTCGAGCA GCTGCGGCGC
GACGGAACGC ACGGGTTCCG GGTCATCTGA
|
|---|
| Protein sequence | MSTTIDAIDA IESPVAAPLA ETHVPTLAYA DVRAALLARK EIALVDVREE DPYAQAHPLW
AANLPLSRLE LEAWSRIPRR DTLIVLYGVH DGVDLAPRAA AKLAELGYTR VYLLEGGLDG
WRAAGGEVFQ DVNVPSKSFG EYVEAHRHTP SLSAQEVKAL LDAKRDVVIV DSRRYEEFQT
MSIPTATSVP GAELVLRIRE LAPDPSTQVI VNCAGRTRSI IGTQSLVNAG IPNPVAALRN
GTIGWLLADQ VLDHGANRRH PQDVSAESRA QAQADARAVA ERANVPRIAL AEVAKLETPD
RTVYKLDVRT PEEYATGHLP GFASAPGGQL VQETDHTAAV RGARIVLADD DGVRADMSAS
WLAQMGWEVY VVDPVDASAR SVTGTWQTPA PPLPAVRTVD ARALAGWLEA GDTAVIDVTR
SANYVARHIP GAWFAVRSDL PAALARIPAA RRYVLTCGSS QLARFAAADL AKLTQAEVWV
LDGGTATWVA AGLPIETGET RLASDRIDRY RRPYEGTSAP RTAMQAYLDW EFGLVEQLRR
DGTHGFRVI
|
|---|
| |