Gene Rpic12D_4597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4597 
Symbol 
ID8022285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1243719 
End bp1244378 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID644833369 
Productcysteine dioxygenase type I 
Protein accessionYP_002984509 
Protein GI241666150 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.459567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CTGCACTCGC CACCGTTTCC GCTGCTGCTT CCTCTGCGGC ACCCGTACAA 
ACACAGTCCA TCGCGCCGCT GCGTGAGTTC GTGACGGCGC TGTCGCGCCT GCTGGATCAG
CAACCGACCG AAGCCGAAAT CCTCTCGCGC GCCGGTGCCC TGCTCGGTGC GCTCGTCGCC
CGCGACGACT GGTTGCCCGC TGAATACTCG CAGCCGCACC CAGAGCACTT CCAGCAGTTC
CTCCTGCATG CCGATTCCGG CGAGCGCTTT TCCATCGTCA GCTTTGTCTG GGGCCCGGGC
CAGCGCACAC CCATTCACGA CCACACCACG TGGGGCCTGA TCGGCATGCT GCGCGGCGCT
GAATACTCGC AGCCGTTCAA GCTCGACGCG CAAGGCAAAC CCCAACCCGA CGGCCCGGCC
ATCCGCCTGG AGCCGGGCGC TGTAGAACAC GTCTCGCCGC GCGTGGGGGA CATCCACCGC
GTGCACAACG CCTTTGACGA TCGCACCTCG ATCAGCATCC ACGTCTACGG CGGCAACATC
GGCGGCATCC ACCGTTCCGT CTACACGGAA GACGGCGAGC GCAAGCCGTT CGTCTCCGGC
TATTCGAATA CCCATCTGCC CAATCTCTGG GACCGTTCCA AGGACACGCC CGCATCATGA
 
Protein sequence
MSTPALATVS AAASSAAPVQ TQSIAPLREF VTALSRLLDQ QPTEAEILSR AGALLGALVA 
RDDWLPAEYS QPHPEHFQQF LLHADSGERF SIVSFVWGPG QRTPIHDHTT WGLIGMLRGA
EYSQPFKLDA QGKPQPDGPA IRLEPGAVEH VSPRVGDIHR VHNAFDDRTS ISIHVYGGNI
GGIHRSVYTE DGERKPFVSG YSNTHLPNLW DRSKDTPAS