Gene Rpic12D_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4593 
Symbol 
ID8022281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1239255 
End bp1240262 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID644833365 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002984505 
Protein GI241666146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG AGACCGCGGG CATCTCGCGC CGCAAGATAT TGCACGCAGC GGCCGCCACG 
GCGCTGGCTG CACCGGCATT GATCCTGGGC CGCAAGGCCT ACTCGCAACA GCGCAAGCTG
ACGTTTGCTT GGAACCAGAA CGCGTTTTGC CTGACGCCCA TCGTGGTGGC GCAGGAACGC
GGCTTCTTCG AAAAGAACGG ACTGCACGTC GATCTGATCA ACTACAGCGG CTCGACCGAT
CAACTGCTCG AATCGATCGC CACCGGCAAG GCAGATGCCG CAGTGGGCAT GATTCACCGC
TGGCTCAAGC CGCTGGAAGC GGGCTTCGAC GTGAAGATCA TCGGCAGCTC GCATGGCGGC
TGTGTGCGGC TTGTGGGTTC CAAGGCGGCA GGCGTCACCA GCCTGGCGGC GCTCAAGGGA
AAAACCGTAG GCGTGAGCGA TCTTGCTGCC CCGGGCAAGC ACTTCTTCAC CATCCTGCTG
GCCAAGAACG GCATTGACCC GGACAAGGAC GTCACGTGGC GCCAGTACCC GGCCGACCTG
CTGGGCGTGG CGGTGGACAA AGGCGAGATC CAGGCGATTG CCGACGGCGA CCCCAACCTT
TTCCTGCTGG AGAAGCGCAC GAACGGCGCC TACGTGGAGC TGGCCACGAA CCTCTCCGGT
GAATACGCAC GCAAGGTCTG CTGCGTGATC GGCGCACGCG GCGAGCTGGT CCGCAATGAC
CGCCCGACGG CATCCGCACT GGCGCGTTCG ATTGTGCAAG CCACGGATTT CGTCAACGAA
AACCCGAATG AGGCGGCCAA GGTGTTTGCC AAGTATTCGC CCAAGGTGGC GCTGGACGAC
TTGCGCAAGC TCTACGCCAC GCTCACGTAC ACGCATCACC CGACCGGCGT CGACCTGCGC
GACGAGATCG CCTTCTACGC GGAAGACTTC CGCCGCATCG GCGTCATCAA GAAGACCACC
GATCCGCAGC GCCTGGCGCA GCACGTGTAC GTGAATGTGC TGGCCTGA
 
Protein sequence
MSEETAGISR RKILHAAAAT ALAAPALILG RKAYSQQRKL TFAWNQNAFC LTPIVVAQER 
GFFEKNGLHV DLINYSGSTD QLLESIATGK ADAAVGMIHR WLKPLEAGFD VKIIGSSHGG
CVRLVGSKAA GVTSLAALKG KTVGVSDLAA PGKHFFTILL AKNGIDPDKD VTWRQYPADL
LGVAVDKGEI QAIADGDPNL FLLEKRTNGA YVELATNLSG EYARKVCCVI GARGELVRND
RPTASALARS IVQATDFVNE NPNEAAKVFA KYSPKVALDD LRKLYATLTY THHPTGVDLR
DEIAFYAEDF RRIGVIKKTT DPQRLAQHVY VNVLA