Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4575 |
Symbol | |
ID | 8022263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1217514 |
End bp | 1219550 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833347 |
Product | flagellar hook-associated 2 domain protein |
Protein accession | YP_002984487 |
Protein GI | 241666128 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.401744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT CGTCCACGAG CAACAACTAC GTTCCGCCGA TCTCCATTCC GGGCATCGGG ACGAACATCG ACGTCAACAC CCTTGTCACG AAGCTGATCC AGGCGGAAAG CAAGGGCATG ACGCTGCGGC AGACGCAGCA AAAGGCCTTT CAGGCGCAAC TGTCGGCAGT CGGCTCGCTC AAAAGCGCGC TGTCGACCGT CCAGACCGCG ATGGCGGCCC TGAACAACCC GGACACATTC ACCGGCAACA AGGCCAGCGG GCACGACACG TCGATCCTCA CGGCTTCGCT GTCCAATACG GCGCCGGCTG GCTCGTACCA AATCAACGTG ACGCAGCTTG CGCAGGCGCA GGTGGTATCG GCCGCCGGGC AGGCGTCCAG CAAGACGCCC ATTGGCGGCG GCACGCCCAC CACCCTCACC TTTTCTTTTG GGAATGTCTC GGGCGGCAGC TTTGCCAATG GCAAATACAC GGGCGCCACG TTCACGCAGA ACGGCAACCA GGCCGGCGGC TCGATCACGA TCGACCCATC GAACAACACG CTCGCCGGTA TCCGCGACGC CATCAATAGC GCCAACCTTG GCGTCTCGGC CAGCATCGTC AACGACGGCA GCAGTTCGCC TTATCGGCTG GTGCTGACGT CCACTGCGGG CGGCGCCAAT TCGGAGATGA AGATTTCCGT GTCGGGCGAC CCGGCCCTGC AATCCCTGCT GAGCCACGAC CCGGCCGGCA CGCAGAACAT GACCGAGGTC GCCACAGGCC GCAACGCGCT TGCCACTGTC AACGGCATCA GCGTGCAAAG CGCCACCAAC ACACTGACGG ACGTGGTGGA TGGCACGTCG TTCACGCTCG CCAAGACCGG CAGCACGACC GTGACGGTGG GCAGCGACGC GGGCCAGGCC AGCCAGTCGG TGCTGAACTT CGTCAAGGCG TACAACGCGC TGCGCATCCA GCTCAACGCG CTGACCAAAT TCGATACCGC GAACGCCGCC AACAACGGCG CGCTGGCCGG CGACGTCAGC ACGAAGGCGA TGATCAACCA GCTGACAGAC GTGCTGGGCC AGGGCATCGG CAACGGCGCG TTCCAGTCGC TCGGCAGCAT CGGCGTGACG ATGGACAAGG AAGGGACGCT GTCGATTGAC GACCCCAAGC TGTCCGCGGC CCTGAAGAAA TCGCCCAGCC AGGTGGCGGC CGTATTTGCC GGCACCGGCA TGGCAACGGA TTCGCTGCTG AAGGTCGCGT CGTTTTCAAC GACCACGCAA GCCGGCAGTT ATGCCGTCAA CGTCACTCAA CTGGCGACGC AGGGCTCGCT CAAGGGCTCG GCGGCCGCCA ACACGACCAT CCAGAGCGGC GTGAACGACA GCCTGTCGGT CACGCTCAGC GGCATCACGA CCAACATCAA GGTGCCGGCC GGCAGCTATA CCGCGTCGAG CCTGGCCGCG CAGATTCAAA GCCAGGTCAA CGCGTCGCCA GACTTGCAGA GAGCCAAGGT GGAAGTCGCC ATCGGCACCG ATGCCAATGG CGTGCTGACG CTGACCGACA AGCAATACGG CTCGGCATCG ACGGTGTCGG TGTCAGGAAA CGGCGCCGCG TCGCTGCTCG GCGGCAGCCC GACGGCCACG GCCGGTCGCG ATGTACAAGG CACCATCAGC GGGGCGGCCG CCACGGGTTC GGGCCAGAAC CTCTACGGCG CCAGGGGCTC GGCCGTTGAT GGCCTGACGG TGCAAGTGTC TGGCGGTGCA TTGGGCGACC GCGGCACCGT CACCGTGCAG CGTGGCTACG CGGCGCAACT GCACACCGTG TCAGGCAACT TGCTGTCGAA CAACGGCATG GTGCAGAACG CCAGCGACGC CATCAACAAC TCCATCACCT CGCTCGGCAA GGAAATCGAT CTGATGCAGA AACAGCTCGA TGCCAAGCAG GCGCTGTATT ACACACAGTT CAATGCGCTA TCGAAGATGG TAGCCAGCAT GACGAATACG AGCAATTACC TGACGACGCA GTTGGCGATA TTGCAGAAGC AGCGGACGGG GGGCTAA
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Protein sequence | MATSSTSNNY VPPISIPGIG TNIDVNTLVT KLIQAESKGM TLRQTQQKAF QAQLSAVGSL KSALSTVQTA MAALNNPDTF TGNKASGHDT SILTASLSNT APAGSYQINV TQLAQAQVVS AAGQASSKTP IGGGTPTTLT FSFGNVSGGS FANGKYTGAT FTQNGNQAGG SITIDPSNNT LAGIRDAINS ANLGVSASIV NDGSSSPYRL VLTSTAGGAN SEMKISVSGD PALQSLLSHD PAGTQNMTEV ATGRNALATV NGISVQSATN TLTDVVDGTS FTLAKTGSTT VTVGSDAGQA SQSVLNFVKA YNALRIQLNA LTKFDTANAA NNGALAGDVS TKAMINQLTD VLGQGIGNGA FQSLGSIGVT MDKEGTLSID DPKLSAALKK SPSQVAAVFA GTGMATDSLL KVASFSTTTQ AGSYAVNVTQ LATQGSLKGS AAANTTIQSG VNDSLSVTLS GITTNIKVPA GSYTASSLAA QIQSQVNASP DLQRAKVEVA IGTDANGVLT LTDKQYGSAS TVSVSGNGAA SLLGGSPTAT AGRDVQGTIS GAAATGSGQN LYGARGSAVD GLTVQVSGGA LGDRGTVTVQ RGYAAQLHTV SGNLLSNNGM VQNASDAINN SITSLGKEID LMQKQLDAKQ ALYYTQFNAL SKMVASMTNT SNYLTTQLAI LQKQRTGG
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