Gene Rpic12D_4571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4571 
Symbol 
ID8022259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1209418 
End bp1209873 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID644833344 
ProductUspA domain protein 
Protein accessionYP_002984484 
Protein GI241666125 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0406402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.225072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAC GAATCCTGCT CGCCGTCGAC GGCAGCCACG CGTCCTACCT CGCGCTGCAC 
CAAGCCATTG TGGTCAGCAA GGCGACGGGC GCGGAAGTCG AAGCCCTCTT CGTTGCCGAT
AGCAGCGACA TCACCTTCGA CATGGTTGGA TCTGACTCGA TTGCCTACGC CAAGCAGGTC
GCCGGCTACG GCCGCGACAC GCTTGCCGAG GTATCGAAGA AGCTGGATGC CGCAGGCGTC
AAACATTCGA CCAAGCTGCT CGAAAACTCC ATTGCGCCCG GGCAGATCTC CGCAACGATC
GTCGCAGAAG CCAACGAGAC CGCAACCGAC CTGATCGTGC TCGGCACACA TGGCCGGCGT
GGGCTCAAGC ATCTGGTGCT CGGCAGCGTG GCCGAAGGCG TGGTCCGCAA GACCAACAAG
CCGGTATTGA TGGTGCGTAG TGAGGTCGAG GAATAA
 
Protein sequence
MYQRILLAVD GSHASYLALH QAIVVSKATG AEVEALFVAD SSDITFDMVG SDSIAYAKQV 
AGYGRDTLAE VSKKLDAAGV KHSTKLLENS IAPGQISATI VAEANETATD LIVLGTHGRR
GLKHLVLGSV AEGVVRKTNK PVLMVRSEVE E