Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4571 |
Symbol | |
ID | 8022259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1209418 |
End bp | 1209873 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833344 |
Product | UspA domain protein |
Protein accession | YP_002984484 |
Protein GI | 241666125 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0406402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.225072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAC GAATCCTGCT CGCCGTCGAC GGCAGCCACG CGTCCTACCT CGCGCTGCAC CAAGCCATTG TGGTCAGCAA GGCGACGGGC GCGGAAGTCG AAGCCCTCTT CGTTGCCGAT AGCAGCGACA TCACCTTCGA CATGGTTGGA TCTGACTCGA TTGCCTACGC CAAGCAGGTC GCCGGCTACG GCCGCGACAC GCTTGCCGAG GTATCGAAGA AGCTGGATGC CGCAGGCGTC AAACATTCGA CCAAGCTGCT CGAAAACTCC ATTGCGCCCG GGCAGATCTC CGCAACGATC GTCGCAGAAG CCAACGAGAC CGCAACCGAC CTGATCGTGC TCGGCACACA TGGCCGGCGT GGGCTCAAGC ATCTGGTGCT CGGCAGCGTG GCCGAAGGCG TGGTCCGCAA GACCAACAAG CCGGTATTGA TGGTGCGTAG TGAGGTCGAG GAATAA
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Protein sequence | MYQRILLAVD GSHASYLALH QAIVVSKATG AEVEALFVAD SSDITFDMVG SDSIAYAKQV AGYGRDTLAE VSKKLDAAGV KHSTKLLENS IAPGQISATI VAEANETATD LIVLGTHGRR GLKHLVLGSV AEGVVRKTNK PVLMVRSEVE E
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