| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4558 |
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| Symbol | |
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| ID | 8022246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1197807 |
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| End bp | 1198943 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644833331 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_002984471 |
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| Protein GI | 241666112 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.987497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0915843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGCCA TTCTCAAACT CGCCTACAAG CTGCTGGTCA ATGACAAGGC CAAGCTGAGC
GGCTTGCTGG TCGGCATTAC GTTTGCCGTG TTTTTGATGA TCGAGATGAC GTCGCTGTTT
GCGGGCGTGC TCAATCGGTC TTCGTCTGCC GTGTACAACA TTGGCGCACG GATGTGGGTC
ATGGACCCGG CTGTCAATAC CGTGGCCAAC TCGATCGGCA TGCCGGATTA CGTCCTTGAT
GCGGTACGCA GCATTCACGG TGTGAAGTTT GCCGTGCCGC TCTATTCAGG CGGCGCGCTC
GTGCGCCTGA ACAGCGGAAC CTATCAGCCC GTGACCGTCG TCGGCATCGA CGACACCAGC
CTGTTCGGCC GCCCTCGCAT GCTCAGTGGC CGTATCCAGG ATCTGTACGG CGAGAACGCC
TTCATCGTCA TCCAGGATGC CGAGTTCGGG AAGCTCGAAA ACCCGCATAT CGGCACGGAA
TTCGAAGTCA ACGACCATCG AGGGGTGATC GTCGGCATTG GCGAGGTGGC GTCCAGCGGA
TTGTTTGGCG TGCCCACCCT GTACACAACG TACCGCCGCG CCGTGCAATA CCTGCCGAGT
ACGCGCTACA CGATGTCGTA CATCCTGATT GAGCCCAAGA CCGAGGCCGA CATTGCGGCG
ATCGAACGTG CGGTCGACCG GCTCGGTTAC CGCGCCCTGA CCAGGGAAGA GTTCATCGGC
CGCATCTCTC ACTTCTATAC CTACCAGACC GGGCTTGGCA CCAACATCCT GCTGATGACG
GTGATCAGCT TCGTGGTGGG GCTGTCGATC TCGGGGCAGA CGTTCTACAC GTTCATCCTG
GAAAACCTCG AGCGCTTTGG CGCACTCAAG GCCATCGGGG CCAAGGGGCG CGAACTGGTC
ACGATGATCG TCTTCCAGGC CACGTTTGTG GCGCTGGTGG GCTACGGGCT GGGGATCGGC
CTATGCGCCG CGTCGATCGC ACTGGTGCGT CTTCGCATTC CAGACTACGC GGCCATGATC
ACCTTCACCA ATCTGATGCT GGCGCTGGCC ATGGTGATCG TGATTGCCGG CATATCGGGC
TACATCGGGG TGCGCAAAGT GCTTCGCATC GAGCCCTTCG ATATCTTCCG GGGTTGA
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| Protein sequence | MQAILKLAYK LLVNDKAKLS GLLVGITFAV FLMIEMTSLF AGVLNRSSSA VYNIGARMWV
MDPAVNTVAN SIGMPDYVLD AVRSIHGVKF AVPLYSGGAL VRLNSGTYQP VTVVGIDDTS
LFGRPRMLSG RIQDLYGENA FIVIQDAEFG KLENPHIGTE FEVNDHRGVI VGIGEVASSG
LFGVPTLYTT YRRAVQYLPS TRYTMSYILI EPKTEADIAA IERAVDRLGY RALTREEFIG
RISHFYTYQT GLGTNILLMT VISFVVGLSI SGQTFYTFIL ENLERFGALK AIGAKGRELV
TMIVFQATFV ALVGYGLGIG LCAASIALVR LRIPDYAAMI TFTNLMLALA MVIVIAGISG
YIGVRKVLRI EPFDIFRG
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