Gene Rpic12D_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4546 
Symbol 
ID8022234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1185195 
End bp1185698 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID644833319 
Producthypothetical protein 
Protein accessionYP_002984459 
Protein GI241666100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0051838 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCCACG CATGTCGTCT TTTGCCACGC GGCCTTTTTG CGGCATTGGC TTTGGCCGCC 
AGCGCGCACG CTGGCGCAGT CGGTCCCGAT GCTGCGGCTC CAGAGGTGCG CTTCCAGAAC
GAGATCGCCT ATGTGTCAGG AGGCGTTGGG AGCGACGAGC GCGACGCCAT GCGTGCGATG
GCACGCCGCT TCAACGTGCG GCTGAACGTG GTGTCGGCCA GAACCAGCGA GGCGTTGTCG
GATGTGGATG TGTCTGTTGC GGATGATCGC GGCAAGCTCC GTTTGCGCGT GCGCACGGAG
GGGCCGCTCT TGTATATGCG CTTGCCTCGC GGGCACTATC AGATCACGGC CGCGTATCGC
GGTGCGATGC AGACCGTGAA CGTGAGCGCA GGCGCGCAGC CGGTTGATGC CGTCGTGCGG
TTGCGCACCG AACCCGGACC AGACGAGTGG CTCCTGTGCC AGCGCGGATG CCCGCGCGCT
GGCGCACGTC CGACGGCGCG ATGA
 
Protein sequence
MSHACRLLPR GLFAALALAA SAHAGAVGPD AAAPEVRFQN EIAYVSGGVG SDERDAMRAM 
ARRFNVRLNV VSARTSEALS DVDVSVADDR GKLRLRVRTE GPLLYMRLPR GHYQITAAYR
GAMQTVNVSA GAQPVDAVVR LRTEPGPDEW LLCQRGCPRA GARPTAR