Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4545 |
Symbol | |
ID | 8022233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1184441 |
End bp | 1185187 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644833318 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_002984458 |
Protein GI | 241666099 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00570408 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAACAC ATCGCATTGC GCTCATTACC GGTGGCATGG GCGGCCTGGG CGAAGCCATT GCCATCCGTC TCCATGCACA AGGGCATCGG GTTGTAGTCA CCCATTCGAT GGGCAATACA CATGTGACTG CATGGATCGC GGAACAGCAT GCCCAGGGGC GGCTGTTCCA GACGTTCGCG GTGGATGTTG CCGACTACGA CGCTTGCCAG CGATGCACGT CCGACGTGCT TTCGACCGTC GGCCCGGTCG ACATTCTGGT CAACAACGCC GGCATCACGC AAGACATGAC CTTCAAGCGC ATGACGCTGG ATGCCTGGCG GAACGTGCTG GCCACCGATC TCGACTCCGT CTTCAACATG ACCAAGCCGC TGTACGAAGG CATGATCGAG CGCGGTTGGG GCCGCATCAT CAACATCTCG TCGGTCAACG GATCGCGGGG CGCGTTCGGG CAGACGAACT ACGCGGCGGC CAAGGCCGGC ATACACGGGT TCACCAAGGC GCTGGCCCTC GAGTGCGCCG CGAAGGGCGT GACCGTCAAC ACGATTTCGC CCGGCTATCT CGCCACGCGA ATGACGCGCG ATATTCCCAG CGACATCATG CAAGAGCGGA TTCTTCCGCA GATTCCCGTA GGCCGCCTCG GCCGGCCGGA GGAAGTGGCT GCCTTGGTGG CCTTCCTGTG CGGCGAGGAC GCTGCCTACG TAACCGGCGC CAATCTGGCC GTGAATGGTG GCTTGCACAT GCAATAG
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Protein sequence | MTTHRIALIT GGMGGLGEAI AIRLHAQGHR VVVTHSMGNT HVTAWIAEQH AQGRLFQTFA VDVADYDACQ RCTSDVLSTV GPVDILVNNA GITQDMTFKR MTLDAWRNVL ATDLDSVFNM TKPLYEGMIE RGWGRIINIS SVNGSRGAFG QTNYAAAKAG IHGFTKALAL ECAAKGVTVN TISPGYLATR MTRDIPSDIM QERILPQIPV GRLGRPEEVA ALVAFLCGED AAYVTGANLA VNGGLHMQ
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