Gene Rpic12D_4545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4545 
Symbol 
ID8022233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1184441 
End bp1185187 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID644833318 
Productacetoacetyl-CoA reductase 
Protein accessionYP_002984458 
Protein GI241666099 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00570408 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAACAC ATCGCATTGC GCTCATTACC GGTGGCATGG GCGGCCTGGG CGAAGCCATT 
GCCATCCGTC TCCATGCACA AGGGCATCGG GTTGTAGTCA CCCATTCGAT GGGCAATACA
CATGTGACTG CATGGATCGC GGAACAGCAT GCCCAGGGGC GGCTGTTCCA GACGTTCGCG
GTGGATGTTG CCGACTACGA CGCTTGCCAG CGATGCACGT CCGACGTGCT TTCGACCGTC
GGCCCGGTCG ACATTCTGGT CAACAACGCC GGCATCACGC AAGACATGAC CTTCAAGCGC
ATGACGCTGG ATGCCTGGCG GAACGTGCTG GCCACCGATC TCGACTCCGT CTTCAACATG
ACCAAGCCGC TGTACGAAGG CATGATCGAG CGCGGTTGGG GCCGCATCAT CAACATCTCG
TCGGTCAACG GATCGCGGGG CGCGTTCGGG CAGACGAACT ACGCGGCGGC CAAGGCCGGC
ATACACGGGT TCACCAAGGC GCTGGCCCTC GAGTGCGCCG CGAAGGGCGT GACCGTCAAC
ACGATTTCGC CCGGCTATCT CGCCACGCGA ATGACGCGCG ATATTCCCAG CGACATCATG
CAAGAGCGGA TTCTTCCGCA GATTCCCGTA GGCCGCCTCG GCCGGCCGGA GGAAGTGGCT
GCCTTGGTGG CCTTCCTGTG CGGCGAGGAC GCTGCCTACG TAACCGGCGC CAATCTGGCC
GTGAATGGTG GCTTGCACAT GCAATAG
 
Protein sequence
MTTHRIALIT GGMGGLGEAI AIRLHAQGHR VVVTHSMGNT HVTAWIAEQH AQGRLFQTFA 
VDVADYDACQ RCTSDVLSTV GPVDILVNNA GITQDMTFKR MTLDAWRNVL ATDLDSVFNM
TKPLYEGMIE RGWGRIINIS SVNGSRGAFG QTNYAAAKAG IHGFTKALAL ECAAKGVTVN
TISPGYLATR MTRDIPSDIM QERILPQIPV GRLGRPEEVA ALVAFLCGED AAYVTGANLA
VNGGLHMQ