Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4536 |
Symbol | |
ID | 8022224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1173800 |
End bp | 1175617 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833309 |
Product | ribonucleotide reductase-like protein |
Protein accession | YP_002984449 |
Protein GI | 241666090 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0042263 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.026709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCAG GGCCTCTGAA CCGTCCAGGC GGACCATCAC CTTTGAGTAC CGCTGTACTT GCAGATCGCT ATCTTGCGCC CGGCGAAACG ACGTGCAATG ACGTATTCAA GCGGGTTGCC CATGCGCTTG CCGCTGCAGA GCAGCCAGAC CAGCGCGCGC ATTTCACGCG CTTGTTCTAC GCCAATCTGC TGCAAGGTGC CATTGGAGCG GGGCGCATCA TGGCGAACGC GGGAAGTGCG AATCACGGGA CGATGGTCAA CTGCTTCGTG CATCCTATCG GCGCTAGCGA GCAATCCGTC GCAGACGCTT CCGATGTCGA ACGCGCTTTG CATGCAGCAC AGCGCACCTT GCAGATGGGT GGCGGGGTCG GCTACGACTT CTCGGTCATC GCCCCTGCTG ATGCTGAGCA GGCAACGTCG AACAGCGGAA CTGGAAGCGT CTGTGCCGTC CTCGACTCAT TTGATCGGGT ATGCGCAACG CAGGCGCTCG TCAACACGCG AGGTGGCGCG CAGATGGCCG TTCTGCGCTG TGACCACCCC GACCTGGCCA CTTTCATTAC TGCCAAACGT GGGCGCAGGC GCTGGGCAAC GTTCAACCTA TCGGTTGCCG TTACCGACGC GTTCATGCGA GCGGTTGCCG ATGACGGTCT CTGGTGCCTG CAGCATCGAG CAGTGCCCAA TGCACAACGG CTGGCTACAG GCGCCCACGC GCTGTCTAAC GGCAAGTGGT GCTACGCAGT CGTTCCCGCA CGGCAGCTTT GGAACATGAT CGCGGAAGCC GCGCATCACA GTGCAGAGCC GGGTCTGCTG TTCATCGATA CGATCAACGC TGCCAATGAC CTTGCCGAGA TCGAGACGAT TGCCGCAACC AATCCTTGTG GAGAACAACC ATTGCCGCCC TGGGGCAGCT GTGTACTGGG GCCGATTGAT GTATCCAGGT GGGTGCAGTG GCCGTTTGGA ATGGGCGGTC AACCACTGTT CGATTTCGTC GGCCTGAGCC GGGCGGTGCG TGTTCAAGTC AGAATGCTCG ACAACGCGAT CGAGATCACA CGCTGGCCGT TGCCTGAGCA TATGCACGAG GCCCAGGCCA AACGCAGGAT CGGCGTAGGC GTGACCGGCC TTGCCGATGC TCTCACAATG ATGTGCCTGC CATACGACGC TCCGGCAGCA CGATGCTTCG CCGCTCAGAT CGGGCGATGC TTGCGTGATA GCGCCTACGC AGCTTCGGCC GCATTGGCAT GCGAGCGCGG GCCCTATCCG CTGTTCAGTC CGGAACGCAG TCTTGCTCCC GGACATTTCA GCGCCGCATT GCCCAAGGCC GTGTGCGAAG CTGTCGCAAA GCACGGACTG CGCAATAGCC ACCTCCTCTC CCTGGCACCA ACGGGTAGCG TAAGCCTGGC GTTCGGAGAT AACTGCTCCA GTGGTATCGA ACCTGCGTTC GATTGGGTGT ATCAGCGTCG CGTGCGTATC CAACATCGCG CGCCGCAGCT TTACCGTACT GAGAACCGCG CCTACAGGCT TTTCCGGGCG CTGTACGGAC AGCGTGCAGC GTTGCCCGGC TACTTTGTCA CCGCAAGGCA GATTGATGGG CTCGACCACT TGCGCATGGT GGCGACGCTG CAACCGTTTG TTGATGCATC CATTTCAAAG ACGGTCCTTC TTCCGTGCAG CGCGTCGTGC GCACAGGTTG CGGCACTGCT CTTTCACGCA TGGCAGTTGC GACTCAAAGG CATCACGATC TTCAGGCCGG ACACCGGTCC GGACGACGTG CTCTCCGAGC TGCCCCCATT GAACGGTCGC CTCACGTGCT TCTGTTGA
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Protein sequence | MRAGPLNRPG GPSPLSTAVL ADRYLAPGET TCNDVFKRVA HALAAAEQPD QRAHFTRLFY ANLLQGAIGA GRIMANAGSA NHGTMVNCFV HPIGASEQSV ADASDVERAL HAAQRTLQMG GGVGYDFSVI APADAEQATS NSGTGSVCAV LDSFDRVCAT QALVNTRGGA QMAVLRCDHP DLATFITAKR GRRRWATFNL SVAVTDAFMR AVADDGLWCL QHRAVPNAQR LATGAHALSN GKWCYAVVPA RQLWNMIAEA AHHSAEPGLL FIDTINAAND LAEIETIAAT NPCGEQPLPP WGSCVLGPID VSRWVQWPFG MGGQPLFDFV GLSRAVRVQV RMLDNAIEIT RWPLPEHMHE AQAKRRIGVG VTGLADALTM MCLPYDAPAA RCFAAQIGRC LRDSAYAASA ALACERGPYP LFSPERSLAP GHFSAALPKA VCEAVAKHGL RNSHLLSLAP TGSVSLAFGD NCSSGIEPAF DWVYQRRVRI QHRAPQLYRT ENRAYRLFRA LYGQRAALPG YFVTARQIDG LDHLRMVATL QPFVDASISK TVLLPCSASC AQVAALLFHA WQLRLKGITI FRPDTGPDDV LSELPPLNGR LTCFC
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