Gene Rpic12D_4531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4531 
Symbol 
ID8022219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1170349 
End bp1171014 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID644833304 
Producthypothetical protein 
Protein accessionYP_002984444 
Protein GI241666085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.674872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0487263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGT TACAGAACCT CTTGCGGGCT GCGCTGGTTG CAGCGTCTCT CGTGTCGACA 
CACGCGGCAT TGGCGCAGGC ACCCACCCCC GAGCCACTAC ACCATCCGAG CCCCGATTTC
TGCGCGCAGA TGCGCAATGC CCGGACACCG GCAGAACGCC GTGCGTTGAT GCAGCGCATG
CAGGATATTC ACGGCTTGAA CGAGTCGGAT CGGATGAGCG GCCGTGCACG AGGAGGGATG
CCCGGCGGCA CGATGAACAG GCGATCGTGG CGGGCCATGT ACGAGGAGGG GTGTCTGAAT
GAAGATGCTT CTGCCGTGCG TCCCATGCCA CATGTGCAAG GAGGCGTGGC TTATGTGTCA
GGTGGGGTCG GGCAGGATGC GGTGGATGCA ATGCGTGGCG TTGCAGCGAA CTACAACCTG
CGCTTGACGT TCATCGAGCA AGGTGGGGCG TACGTTTCAG AAGTCGACAC CCGTATTCGT
TCCGCAGACG GGGCGGTGTC CCTGGTGGTC GTAACGGAAG GCCCGCTGCT CTACGCTCGC
CTGCCGCGTG GCAAGTACCA AGTCAGTGCG TCTTATAACG GTGTGGTACG TCAGGGCACG
CTTGTGGTGC CGGCACATGG AGCGATCGTG CGCACGATGA CTTGGCCCCG CCAAAGGACT
CGGTAG
 
Protein sequence
MLRLQNLLRA ALVAASLVST HAALAQAPTP EPLHHPSPDF CAQMRNARTP AERRALMQRM 
QDIHGLNESD RMSGRARGGM PGGTMNRRSW RAMYEEGCLN EDASAVRPMP HVQGGVAYVS
GGVGQDAVDA MRGVAANYNL RLTFIEQGGA YVSEVDTRIR SADGAVSLVV VTEGPLLYAR
LPRGKYQVSA SYNGVVRQGT LVVPAHGAIV RTMTWPRQRT R