Gene Rpic12D_4528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4528 
Symbol 
ID8022216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1168930 
End bp1169475 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content58% 
IMG OID644833301 
Productheat shock protein Hsp20 
Protein accessionYP_002984441 
Protein GI241666082 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.550609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0462291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT CCGATACCAA GCTTCCCGTG AAGACCGGCA CGGAAGCATC GACCAAACAA 
GCCGGTGGCA TGCAACCCTG GCGCGCATTC GACAACCTGC GGCAAGAGGT TGCACGTGTC
TTCGATGATT TCGACCGCGG ATTTCATCTC TTTCCGTTTC ATCGCGCGGC GCTGGATATC
GCGCCGTTCT GGCGGCGCGA ATGGGCATTG ACGTCCGCGC CCGCAGTAGA CGTTGTCGAA
ACCGATAAGG CTTACGAGAT CAAAGCCGAC CTGCCTGGCA TGGAAGAGAA GGACGTCGAG
GTCAAGCTGG TCAACAGCGG CTTGACCATC AAAGGCGAGA AGCAGGAAGA GAAGGAAGAA
AAACAAAAGG ACTACTACCT GCATGAACGC CACTTCGGGG CGTTCGAGCG GTCATTCCGC
ATGCCAGACG GCGTCGATAC AGACAAGATC CAGGCCAGCT TCAAAAACGG CGTATTGACG
GTGACGCTGC CCAAGACGGA CGCGGCGCAG GCGGCTTCCA AGACCATCCC CGTAAACGGG
GGCTGA
 
Protein sequence
MAESDTKLPV KTGTEASTKQ AGGMQPWRAF DNLRQEVARV FDDFDRGFHL FPFHRAALDI 
APFWRREWAL TSAPAVDVVE TDKAYEIKAD LPGMEEKDVE VKLVNSGLTI KGEKQEEKEE
KQKDYYLHER HFGAFERSFR MPDGVDTDKI QASFKNGVLT VTLPKTDAAQ AASKTIPVNG
G