Gene Rpic12D_4514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4514 
Symbol 
ID8022202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1151945 
End bp1152367 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content58% 
IMG OID644833288 
Productheat shock protein Hsp20 
Protein accessionYP_002984428 
Protein GI241666069 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.165488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.480818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC TCAAGCGTTA TGACCCGTTC GCCATTGAAC CGGTTGGCGA TATCTTCCAG 
GGGCTTCTGC GCTCGGTTCG CGGCAGCATG GATAGCGCGC TGCCATTCAA GGTGGATGTG
ACGGAGTCTG ACAAGGCATA CAGCGTTGTC GCAGAAATCC CGGGTGCGAA AAAGGAAGAT
ATCGACGTGA CGGTCGATCG CGGTACGGTC ATGATCTCGG CCAAGGTGGA GCGCACTTCC
GAAGAGAAGG AAGGCGAACG CATCATCCGC AGCGAGCGCT ACAGCGGCAC CATGCAGCGC
ATGTTCACGC TGGATGCGGC AGTCGATGAG AGCAAGGTCG ACGCCACGTA CGAAAACGGA
CTGCTGCGTG TGACGCTGCC CAAGAAGGAC GCCTCTCCAC AGCAGCGCAT CACGATTCGC
TAG
 
Protein sequence
MSQLKRYDPF AIEPVGDIFQ GLLRSVRGSM DSALPFKVDV TESDKAYSVV AEIPGAKKED 
IDVTVDRGTV MISAKVERTS EEKEGERIIR SERYSGTMQR MFTLDAAVDE SKVDATYENG
LLRVTLPKKD ASPQQRITIR