Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4505 |
Symbol | |
ID | 8022193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1140830 |
End bp | 1141354 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644833279 |
Product | cytochrome B561 |
Protein accession | YP_002984419 |
Protein GI | 241666060 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.265021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATCCG AACTGAAATA CTCCTTCACC ATGCGCGCGC TCCATTGGCT GGTGGTCCTG GCGGTGTTGA TCGCCGTCGT GGCCATCGAA ATCATGGATT TCTTCCCGAA AGGCAGTGCC GAGCGCGCAG CGCTATTCAT CATTCACCAG ACGGCGGGGC TTTCCTTGCT CGCTTTGATG GTGTTGCGCC TGTTGGCCCG GGTGGCCACG CAGGCCCCGC CTCCCGTTCC GGGCACACCG CTGATGCAGC TTGCAGCACG ACTTACGCAT GGCGCGCTCT ATGCACTGAT GGTTGGGATG CCCGTTCTGG GCCTGTTGGC ACTGGCCTGG GGTGGCAAGC CGATCCAACC GTTCGGGCTG GATCTGCCGC TGGCGGTTGC ACAAGACAAG ACGTTGGCGC ACTTGGCCAA GGAGGTGCAT GAGTCGGGCG CCACGCTGGT CTATATCGCG GTGGGACTGC ATGCCGCCGC GGCGCTCTGG CATGAATTCA TCCTGAAGGA TCGGCTGCTG CGCCGCATGA TCTAG
|
Protein sequence | MQSELKYSFT MRALHWLVVL AVLIAVVAIE IMDFFPKGSA ERAALFIIHQ TAGLSLLALM VLRLLARVAT QAPPPVPGTP LMQLAARLTH GALYALMVGM PVLGLLALAW GGKPIQPFGL DLPLAVAQDK TLAHLAKEVH ESGATLVYIA VGLHAAAALW HEFILKDRLL RRMI
|
| |