Gene Rpic12D_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4505 
Symbol 
ID8022193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1140830 
End bp1141354 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID644833279 
Productcytochrome B561 
Protein accessionYP_002984419 
Protein GI241666060 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.265021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCG AACTGAAATA CTCCTTCACC ATGCGCGCGC TCCATTGGCT GGTGGTCCTG 
GCGGTGTTGA TCGCCGTCGT GGCCATCGAA ATCATGGATT TCTTCCCGAA AGGCAGTGCC
GAGCGCGCAG CGCTATTCAT CATTCACCAG ACGGCGGGGC TTTCCTTGCT CGCTTTGATG
GTGTTGCGCC TGTTGGCCCG GGTGGCCACG CAGGCCCCGC CTCCCGTTCC GGGCACACCG
CTGATGCAGC TTGCAGCACG ACTTACGCAT GGCGCGCTCT ATGCACTGAT GGTTGGGATG
CCCGTTCTGG GCCTGTTGGC ACTGGCCTGG GGTGGCAAGC CGATCCAACC GTTCGGGCTG
GATCTGCCGC TGGCGGTTGC ACAAGACAAG ACGTTGGCGC ACTTGGCCAA GGAGGTGCAT
GAGTCGGGCG CCACGCTGGT CTATATCGCG GTGGGACTGC ATGCCGCCGC GGCGCTCTGG
CATGAATTCA TCCTGAAGGA TCGGCTGCTG CGCCGCATGA TCTAG
 
Protein sequence
MQSELKYSFT MRALHWLVVL AVLIAVVAIE IMDFFPKGSA ERAALFIIHQ TAGLSLLALM 
VLRLLARVAT QAPPPVPGTP LMQLAARLTH GALYALMVGM PVLGLLALAW GGKPIQPFGL
DLPLAVAQDK TLAHLAKEVH ESGATLVYIA VGLHAAAALW HEFILKDRLL RRMI