| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4501 |
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| Symbol | |
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| ID | 8022189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1136610 |
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| End bp | 1137314 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644833275 |
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| Product | ABC transporter related |
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| Protein accession | YP_002984415 |
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| Protein GI | 241666056 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.293779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAACGG TGTTCAATAT TCAGGCCGTC AGCAAGGTCT ACCCAATGGG GAGCGTGAGC
GTGCGCGCTC TGGAACACGT CGACCTGGAA CTCGGGCCGG GTGAAATCGT TGTGCTGCTC
GGGGCGTCGG GTAGCGGAAA ATCCACGCTA CTCAACCTGA TGGGCGGGCT GGATACACCA
ACGAGCGGTT CCATCGTGTA TCGGGACCAC GATCTTTCCC ACGCGGGAGA CCGGGGCCTG
ACGCGTTTCC GACGGGAACA TGTTGGATTC GTCTTTCAGT TCTACAACCT GATTCCAAGC
CTGACTGCCC GCGAGAACGT CGCACTGGTG ACGGACATCG CGGAGCATCC GCTGGATCCC
ACTGAGGCTC TGAACAGGGT CGGGATCGGG ACGCTTGCGG ATAACTTTCC CTCACAGATG
TCGGGTGGTG AGCAGCAACG CGTTGCCATC GCCCGCGCGG TCGCAAAACG GCCAGATGTC
CTTCTGTGCG ATGAGCCGAC CGGCGCACTG GATTTTCGGA CCGGGCAACT GGTGCTGGAG
GTGCTCGAAC AGGTGAACCG CGAGTTCGGC ACCCTGATCG TGATCGTCAC GCACAACGCC
GTCATCGCCG ACATGGCGGA TCGTGTCGTT CGTATGAGCA GCGGCACCAT TGTCGAGCAC
CGCCGAAACG GGCAGCGTGC CCGAGTCGGA GACCTGGCAT GGTGA
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| Protein sequence | METVFNIQAV SKVYPMGSVS VRALEHVDLE LGPGEIVVLL GASGSGKSTL LNLMGGLDTP
TSGSIVYRDH DLSHAGDRGL TRFRREHVGF VFQFYNLIPS LTARENVALV TDIAEHPLDP
TEALNRVGIG TLADNFPSQM SGGEQQRVAI ARAVAKRPDV LLCDEPTGAL DFRTGQLVLE
VLEQVNREFG TLIVIVTHNA VIADMADRVV RMSSGTIVEH RRNGQRARVG DLAW
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