| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4500 |
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| Symbol | |
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| ID | 8022188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1134247 |
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| End bp | 1136616 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644833274 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_002984414 |
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| Protein GI | 241666055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.140926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGCA TGCTTGTCCG GCTACTCTGG CGAGACCTCT GGCAAATGCG GGCGCAGGTC
TTGGCGGCAG TCCTCGTTGT CGGATGTGGT GTCGCCACGT TTGTTGCGAT GCGCAGCACC
TATCTGGCTT TGTTGAACGC CCAGCAGGAC TACTACGCGT CATACCGTTT TGCCGATCTC
TTCGTGCATC TGAAGCGCGC ACCACTGGAG ATTGCCTCGC GCGTTGCTGC ATTGCCTGGA
GTGTCACATG TGGACGCACG CGTAGTGTCA GATGTCACGG TCGACATACC CGGCCTTTCC
GAGCCAGCCA CGGCGCGCCT CGTTTCCATC CCGGAGCTCG GTTGGCCCGC GCTCAACCTG
CTGCATCTTC AAAGCGGCCG ATACATTGCG CCGGGCAGAG AGGATGAGGT GTTGGTCAGC
GCGGCCTTCG CAGATGCCAA CAGCCTGCGA GCGGGCGAGT ACTTCAGCGC CATCCTGAAC
GGCCGCTGGA AGCGCCTGCA CATTGTTGGT CTTGCAATCT CGCCGGAGTA TGTCTACGAG
GCAGGCGCGG GCTCCATCTT CCCGGACAAC CGCCATTACG GCATAGTCTG GATGGGAGTG
AATGCGGTTT CGGCAGCGTT CCGCATGGAT GGCGCTTTCA ATGATCTCGT GCTGTCTCTC
GATGGCAGCG TGCCCGCGCC GCACGTCATC GCGCAAATCG ATCGAACGTT GTTGCCGTAC
GGCGGACTTG GAACAATCAG CCGCGATCAC CAAATATCGA ATCGGTTCAT TACCGACGAG
ATCGCACAGA ACCGCGTGAC TGCCACCTAT GTGCCAGCCA TCTTTTTTCT GGTCGCAATG
TTTCTGCTGC AGAACGTCCT GACCCGACTG ATCGATACAC AGCGCTCACA GATCGGCTTG
ATGAAGGCGT TTGGATACGG TGACCTTTCA GTCGGTTTGC ATTACCTGCA GCTCGGATGC
GTCGTTGCTG CGGCAGGCAC CGTTGTCGGT ATTGGAGGGG GATTGGCGTT AGGGACATAT
CTAACCGACC TCTACGCCCG GTACTACCGG CTGGCCCACC TCGAGTTTCG CGCCGATTTT
TCGACGATGG CCTGGGCGTT CTTCATTAGC TTTGGAACGG CGGTTGGCGG TGCCATCGCG
AGCACTGCGA AAGCCATGAG ATTGATGCCC GTCGAGGCGC TTCGCGCGGT CGTTCCGCCA
GCGTTTTCAG TGGGCTGGGT AGAGCGGGCG GGCATCTACC GGCAAATGAG CGTGGTGTGG
CGAATGATTG CGCGCAATAT CGCGCGCCAG CCCGTCAAGT CGCTCCTTGG TTCTTTGGCC
ATTGCGTGCG CAAGCGCGAT TCTTGTCGTC GGCGGGTTTT TCTTCGATTC AATCGATTTC
CTTTTCGATA CCCAATTCCA GCAAATCGAG CGGCAGGATG TGACGGTGGC CTTTTCTCAA
CCCTTATCCC ACCGAGCCAT CTACGCAATA GAGCGTCTGC CCGGCGTGCT GAAGGTCGAG
GGGTTCCGCG ATGTACCGGT CAAGCTATCC GCGGGGTATC GGTCTCGGCG CGTCTCGCTG
AGTGGGATCG CTCAGAAGGC GGATCTGCAC AGGCTAATTG ATGATGAGGG CAGACCGTTG
CATATGCCCC CGGACGGCTT GGTGGTTTCG GCCCGACTCG CCGCCGTGCT TGGCATAAGA
CCTGGTGATC CGATCACGAT CGAAGTGCTT GAAGGAGAGC GTCAAACCAG GCAAGTCACC
TTGATGCGGC TGTCCGGAGA TCTGGTGGGC GTCGCGGCCT ACATGGACCA GCATGCACTG
GCAAAGCTGC TTGGGGAGAG TGGAAACTGG TCAGGTGCGA GGCTGTCCGT CGATCAGCAT
GCGGCTGCCC ATCTGTATGC GACGCTCAAG CGTCTGCCAG CGGTGAATGC AGTGGCGGTT
CGCCAGTCCG TCATCGCCAG CTTCCGCAAG ATCATGGACG AGAGCGTTCG TCTGTCCACG
TCCATCAACT TCGCCTTTGC CTGTGTGATC GCGTTTGGTG TGGCGTTCAA CGGCATGCGC
ATCGCTTACT CGGAACGTGT TCAACAGTTG GCTTCCCTGC GCGTACTCGG GTTCACGCAG
GCCGAAGTCG CGTGGATTCT GCTCGGGGAG CAGTTTGTGC TCACCGCCAT TGCGCTGCCA
GCCGGACTTC TGCTCGGCTA CGGCGTGTGC GGTCTCCTCT CTACTCGGCT GGCAACCGAC
TTGTACCGCC TTCCGCTCGT GGTTCACGCC GCGACCTTCG CTTACGCATT CGTTGTAGCC
GGTGGCGCGG TCGTGTGTTC GGGGCTGCTG GTGGCGGCCA AGATCAGACG GTTGGATATC
GTCGCAGTGC TCAAGGCAAG AGAATCATGA
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| Protein sequence | MVSMLVRLLW RDLWQMRAQV LAAVLVVGCG VATFVAMRST YLALLNAQQD YYASYRFADL
FVHLKRAPLE IASRVAALPG VSHVDARVVS DVTVDIPGLS EPATARLVSI PELGWPALNL
LHLQSGRYIA PGREDEVLVS AAFADANSLR AGEYFSAILN GRWKRLHIVG LAISPEYVYE
AGAGSIFPDN RHYGIVWMGV NAVSAAFRMD GAFNDLVLSL DGSVPAPHVI AQIDRTLLPY
GGLGTISRDH QISNRFITDE IAQNRVTATY VPAIFFLVAM FLLQNVLTRL IDTQRSQIGL
MKAFGYGDLS VGLHYLQLGC VVAAAGTVVG IGGGLALGTY LTDLYARYYR LAHLEFRADF
STMAWAFFIS FGTAVGGAIA STAKAMRLMP VEALRAVVPP AFSVGWVERA GIYRQMSVVW
RMIARNIARQ PVKSLLGSLA IACASAILVV GGFFFDSIDF LFDTQFQQIE RQDVTVAFSQ
PLSHRAIYAI ERLPGVLKVE GFRDVPVKLS AGYRSRRVSL SGIAQKADLH RLIDDEGRPL
HMPPDGLVVS ARLAAVLGIR PGDPITIEVL EGERQTRQVT LMRLSGDLVG VAAYMDQHAL
AKLLGESGNW SGARLSVDQH AAAHLYATLK RLPAVNAVAV RQSVIASFRK IMDESVRLST
SINFAFACVI AFGVAFNGMR IAYSERVQQL ASLRVLGFTQ AEVAWILLGE QFVLTAIALP
AGLLLGYGVC GLLSTRLATD LYRLPLVVHA ATFAYAFVVA GGAVVCSGLL VAAKIRRLDI
VAVLKARES
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