| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4494 |
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| Symbol | |
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| ID | 8022182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1129082 |
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| End bp | 1129792 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644833268 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002984408 |
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| Protein GI | 241666049 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.384346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00278013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATCCC AACTTCGCTA CGCTCAAGAC GTTCGTTGCG GGAACAACGC CGGTGGTATA
CCTTTGCCAC ATCCCGTCAT GGGCAACCGA GGCACGCGAA ATCATATGCA CGTTGTCGGA
GCATCTTTGC CCGAAGCCGA GGGCACGATA TCAGCGCGCC AGGAAGCCGT TCGGGAACGG
CTCGTTGAGT TGCTCAAGCA AACTGGCGAA GGAAGTAAAT CAGCGTTCGC AGAGCTCTAC
ACGCTAACTT CTCCCAAACT CTATTCGTTG GCGTACGGAA TCCTGCGCAG CTCAGGTGAA
GCCGAAGACG TGCTGCAGGA TATCTATGTC GCCATCTGGC AACGCGCCGA CCAATTCGAT
CCTCATCGGG GGACCGCCAT GACATGGCTG ATCTCGCTGG CGAGGAACAA GTCGATCGAT
CGTCTTCGGC AATCGCGCGA GACCACCGGT GATGAGGCGG ACTGGGGCCA GATCGTCGAT
GAACGGGCAA CGCCATCAGA AGTGGCGGAC ATGAGCCAGG AGCATCGACG CCTGGAGAGT
TGCATTCGCA AGCTGGAGGG TCGCCAGCGT GGTGTGATCG TGGAAGCGTT CTATACAGGG
GCGACTTACG CTGAACTCGC AGCGCGTCTG AGCGTGCCGG TCGGTACGAT GAAAAGTTGG
GTGCGACGCA GCCTGCTGCA ACTGAAGATG TGTCTGGAGC AGCAGTCATG A
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| Protein sequence | MSSQLRYAQD VRCGNNAGGI PLPHPVMGNR GTRNHMHVVG ASLPEAEGTI SARQEAVRER
LVELLKQTGE GSKSAFAELY TLTSPKLYSL AYGILRSSGE AEDVLQDIYV AIWQRADQFD
PHRGTAMTWL ISLARNKSID RLRQSRETTG DEADWGQIVD ERATPSEVAD MSQEHRRLES
CIRKLEGRQR GVIVEAFYTG ATYAELAARL SVPVGTMKSW VRRSLLQLKM CLEQQS
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