| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4489 |
|---|
| Symbol | |
|---|
| ID | 8022177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 1124845 |
|---|
| End bp | 1125321 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644833263 |
|---|
| Product | succinate dehydrogenase, cytochrome b556 subunit |
|---|
| Protein accession | YP_002984403 |
|---|
| Protein GI | 241666044 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000614733 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTC AAACTAAACA ATCTCATCTG CTCAGGAATC TGTTTGAAGT CTGTTTGGAG
GACCACGTGG CAATCGATTC AAAAAACGGA GCGGTCATCT ACAGGAACAT CGGTTTGGGC
GACATCGCCC GCTACCGCTT GCCCTGGGCC GGTAAGGTGT CCATCCTGCA CCGTGCCAGC
GGTGCGCTGA TGTTCCTTCT TCTTCCGTTC GTGCTGTACT TGTTCGAACA AAGTCTCACG
TCGGAAATCA GTTTCGCCAA GTTCTCGGCG CTTCTGTCCA ACGGTTTTGC CAAGGTCGTC
GTCCTCGCGC TCATCTGGGC TTATCTGCAC CATTTCTGCG CTGGCGTCCG TTACCTGATC
CTCGATCTGC ATATTGGCAT CGACAAGGCT TCGGCCTCCA AGTCGGCTGT GAGCGTGCTG
ATCGTCAGCC TGCTGCTGAC CGTCGTGTTC GGCGCCAAGC TGTTCGGCCT GTTCTGA
|
|---|
| Protein sequence | MLRQTKQSHL LRNLFEVCLE DHVAIDSKNG AVIYRNIGLG DIARYRLPWA GKVSILHRAS
GALMFLLLPF VLYLFEQSLT SEISFAKFSA LLSNGFAKVV VLALIWAYLH HFCAGVRYLI
LDLHIGIDKA SASKSAVSVL IVSLLLTVVF GAKLFGLF
|
|---|
| |