Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4483 |
Symbol | |
ID | 8022171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1118491 |
End bp | 1118973 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644833257 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_002984397 |
Protein GI | 241666038 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000935764 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACGG ACCCCCAACA GCGGCGCGTT GCGCCGCCGT TTCGGGCCGG TTATCGGCAA CGTAGAACTC TCGGATACAG TTGTTCTGTA ATAACTTCTC AAGCCAAATT GATTTTTGGA GTGGATATGG AAATGGAATC AAGAATATTT TCGGTAACAG AATATATTCG TCCGTCTGAC GGCGAACCAA TTCGTTCAGT GGTTCTGGAA ACCAAGGACT CAGCAGTTGT TGTTTGGCAT GCCCATCCTG GGCAAGAAAT AACCGCTCAT GTTCACCCGG ACGGCCAAGA TACTTGGACG GTTATCTCTG GAGAGGCTGA GTATTACCAA GGAGGCGGCA AAGTCGCTCA TCTAAAGGCT GGAGATATTG CCATAGCAAA ACCTGGCCAA GTGCATGGCG CTCTAAATAC TAGTCCAGTG CCGTTTGTAT TTGTCTCAGT GGTTGCATCT GGCAACGCGG GTTTTGCGTT GGCTGAAAAA TAG
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Protein sequence | MNTDPQQRRV APPFRAGYRQ RRTLGYSCSV ITSQAKLIFG VDMEMESRIF SVTEYIRPSD GEPIRSVVLE TKDSAVVVWH AHPGQEITAH VHPDGQDTWT VISGEAEYYQ GGGKVAHLKA GDIAIAKPGQ VHGALNTSPV PFVFVSVVAS GNAGFALAEK
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