Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4452 |
Symbol | |
ID | 8022140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1090745 |
End bp | 1092241 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833226 |
Product | Amine oxidase (flavin-containing) |
Protein accession | YP_002984366 |
Protein GI | 241666007 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.383006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.183412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATT TTGCAAAGAA AGGCGATGAG GCGCCGGAGG CGGCAGCGCT CACGCGGCGT GGCTTTCTCG GCATGGCCGC ATCGGTGACA GCTGCGGCGA CGGCGGCGGT ATTGCCCAAG GTGGCGAGCG CCGCTGTTGC CGCCGGCGAT GAGCGCGACG TGCTCGAGGT GGCCATCATC GGTGCCGGGC TGGCCGGCCT GACCGCTGCA CGTGACCTGA AGCGTGCGGG GTGCGAATCC TTCGTGGTGC TGGAGGCACG CGACCGTGTT GGCGGACGCA CCCTCAACCA CGATCTCGGC AAAGGCTACT TCTCGGAATC GGGCGGCCAA TGGATCGGGC CGGGCCAGAC CGCGGTTGCC GATCTGGCTC GCGAGCTGGG TGTTGGTACG TTTCCCACCT ACTGGCAGGG CAAGACGGTG ATGCTGGCCG GTGGCGCGCG TGCCGCAGTC GATACCGAGG GCGGCTTCGG CACGGATCCG AAGATTGCAC ATGAACTCGA GGAACTGGCC AAAAGCGTGC CGTGTGGCGC GCCGTGGAAA TCGCCGCGCG CCGCCGAGTT CGACGCGATG TCGGTCGGCG ACTGGCTGGT GAAAAAGAAC ATCGCAAACG CAGACCAGAT CGGTTGGTCG ACCGGCTTGG CGATCACGGG TGGCGCCTCG CCGGCGCGAC TGTCGCTGCT GCACTGGTTG TCGATGGTCA ATTCAGCCGA ATGCAACTAC GACCGGCTCG AAGCGGTTAA GGACGGCGCG CAAGGCACCC GACTCTCGGG CGGCTCGCAG ATTCTGTCGA TCAAGATGGC GGAAGCGTTG GGTAACAAGG TCCGACTGTC GAGCCCCGTG CTGCGCATTG AGAACTGGCA GAACGGACCG GTCGCCATTC ATACCGCCAA TGGTGTGGTC CGTGCGCGTA ACGTGATCGT CGCGCTCGCG CCGATGTTGT GCAATCAGAT CGCCTTCGAC CCGCCGCTGC CGGAGAAACG CCGCGAAATG CAGCGCCGCT GGCCGGCGTT TGCGCCCGGA CGCAAGACGA CGCACGTCTA CAAGAAAGCG TTCTGGCGCG ACAAGGGCCT GAACGGCTGG ATTTTTCAAC CGGGGGGGCC GGTGCTTTGG GCGTACGACA ACTCGCCGGA GGATGTCTCG TTCGGCGTGA TCAACGCGTT CGTGCACATC AGCATGCTGC CGGCCGATCC GAAGGAGGCC GAGGCCCAGC TCTCGCAGAT CTATGCCGAG GCGTTTGGCG ATGAAGCGCT GCACCCCATC GCATTCCATC AGCGTGATTG GCTCAAGGCA GACAAATGGA CGCTGAGCTG CGTGTCGCCG ATGCCGCCCG GTTTTCTCAC CACGTACGGT GAAGCCCTGC ATCCGTCTGT TGGCAAGCTG ATCTGGTCGG GCACGGAAAC GGCGGAAATC TGGGCGGGTT ACATGGACGG TGCGGTGCGT TCCGGCCACA AGGCAGCGTT GCAGGCGCTA CAGGCCGTAG CCGGGGGGAA GGCTTGA
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Protein sequence | MDDFAKKGDE APEAAALTRR GFLGMAASVT AAATAAVLPK VASAAVAAGD ERDVLEVAII GAGLAGLTAA RDLKRAGCES FVVLEARDRV GGRTLNHDLG KGYFSESGGQ WIGPGQTAVA DLARELGVGT FPTYWQGKTV MLAGGARAAV DTEGGFGTDP KIAHELEELA KSVPCGAPWK SPRAAEFDAM SVGDWLVKKN IANADQIGWS TGLAITGGAS PARLSLLHWL SMVNSAECNY DRLEAVKDGA QGTRLSGGSQ ILSIKMAEAL GNKVRLSSPV LRIENWQNGP VAIHTANGVV RARNVIVALA PMLCNQIAFD PPLPEKRREM QRRWPAFAPG RKTTHVYKKA FWRDKGLNGW IFQPGGPVLW AYDNSPEDVS FGVINAFVHI SMLPADPKEA EAQLSQIYAE AFGDEALHPI AFHQRDWLKA DKWTLSCVSP MPPGFLTTYG EALHPSVGKL IWSGTETAEI WAGYMDGAVR SGHKAALQAL QAVAGGKA
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