Gene Rpic12D_4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4451 
Symbol 
ID8022139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1090203 
End bp1090709 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID644833225 
Productcytochrome c class I 
Protein accessionYP_002984365 
Protein GI241666006 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.676804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.145709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGCTT ATGATAGCGA ACTGGCCTCA TCTTGGCATG ACCCCTATGA GGGCAACGCA 
CGCGCCCAGA CTTATCCGCG CCTGGCGGGT CAGCCGGAGG CCTACCTCAA GAAGCAGCTC
ACCGCCTTCG CCAGCGGCGA GCGCAGCAAT TCGACTATGA CGTCGCTGGC AGCGAGCATG
TCGCAACACG AGATCGACGG CTTGGCGGCG CATTTCTCGA AGATGACGCC GTTGCCGAAC
ACGACATTCC AGGCGGACCC GGCCCGCGTG GCGCGCGGCG AGGCGCTGGT TAAGGCCAAC
AACTGCGCCG CTTGTCACGG GCAGCAGCTG GAGGGCAAAG ACCTGTATCC GCGACTGGCC
GGGCAGGGTT ACGGCTATCT GCGCGATCAG TTGAACAACT TCAAGAGCGG TGCGCGCCGC
GATGCCACGG GTTCGATGAC TGCGGTCGTC GGAGCGCTGT CGCAGCAGGA TATCGACGAC
CTCGCGCACT ACATCGCAAG CCGATAA
 
Protein sequence
MKAYDSELAS SWHDPYEGNA RAQTYPRLAG QPEAYLKKQL TAFASGERSN STMTSLAASM 
SQHEIDGLAA HFSKMTPLPN TTFQADPARV ARGEALVKAN NCAACHGQQL EGKDLYPRLA
GQGYGYLRDQ LNNFKSGARR DATGSMTAVV GALSQQDIDD LAHYIASR